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rifcsphigho2_01_scaffold_828

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_828_1
CG_Micra_06, Micraarchaeota, Archaea

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3..503
-----------------
DNA (501bp)
protein (167aa)
Tax=CG_Micra_06
rifcsphigho2_01_scaffold_828_2
CG_Micra_02, Micraarchaeota, Archaea

Not on your lists

comp(552..1712)
-----------------
DNA (1161bp)
protein (387aa)
trm; N2,N2-dimethylguanosine tRNA methyltransferase (EC:2.1.1.32)
tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PY48_METTM
tRNA (guanine-N2)-dimethyltransferase Tax=CG_Micra_02
rifcsphigho2_01_scaffold_828_3
CG_Micra_06, Micraarchaeota, Archaea

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comp(1743..7364)
-----------------
DNA (5622bp)
protein (1874aa)
Tax=CG_Micra_06
rifcsphigho2_01_scaffold_828_4
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(7640..9712)
-----------------
DNA (2073bp)
protein (691aa)
DEAD/DEAH box helicase domain protein; K03726 helicase [EC:3.6.4.-] Tax=CG_Micra_03
ski2-type helicase; K03726 helicase [EC:3.6.4.-] id=5042166 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
ski2-type helicase
rifcsphigho2_01_scaffold_828_5
Candidatus Acidianus copahuensis, Acidianus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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comp(9850..12102)
-----------------
DNA (2253bp)
protein (751aa)
Uncharacterized protein {ECO:0000313|EMBL:EZQ10024.1}; TaxID=1160895 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Acidianus.;" source="Candidatus Acidianus copahuensis.;
rifcsphigho2_01_scaffold_828_6
CG_Micra_02, Micraarchaeota, Archaea

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comp(12287..13045)
-----------------
DNA (759bp)
protein (253aa)
zinc/iron permease Tax=CG_Micra_02
zinc/iron permease
zinc/iron permease id=5240831 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_828_7
Cenarchaeum symbiosum, Cenarchaeum, Cenarchaeales, Thaumarchaeota, Archaea

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13147..13539
-----------------
DNA (393bp)
protein (131aa)
Transcriptional regulator n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RWH0_CENSY
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ABK77687.1}; TaxID=414004 species="Archaea; Thaumarchaeota; Cenarchaeales; Cenarchaeaceae; Cenarchaeum.;" source="Cenarchaeum symbiosum (strain A).;"
rifcsphigho2_01_scaffold_828_8

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comp(13588..14238)
-----------------
DNA (651bp)
protein (217aa)
high-affinity nickel-transporter id=5045818 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
High-affinity nickel-transporter {ECO:0000313|EMBL:KHO46431.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
high-affinity nickel-transporter
rifcsphigho2_01_scaffold_828_9
Thermococcus onnurineus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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14346..15674
-----------------
DNA (1329bp)
protein (443aa)
Hypothetical 2-methylthioadenine synthetase n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YTV6_THEON
2-methylthioadenine synthetase
Hypothetical 2-methylthioadenine synthetase {ECO:0000313|EMBL:ACJ17047.1}; TaxID=523850 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococ
rifcsphigho2_01_scaffold_828_10
CG_Micra_02, Micraarchaeota, Archaea

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15741..16730
-----------------
DNA (990bp)
protein (330aa)
Putative uncharacterized protein Tax=CG_Micra_02
rifcsphigho2_01_scaffold_828_11
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

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16935..17549
-----------------
DNA (615bp)
protein (205aa)
Putative uncharacterized protein n=2 Tax=Chloroflexus RepID=A9WC93_CHLAA
hypothetical protein
Tax=RBG_16_Chloroflexi_54_11_curated
rifcsphigho2_01_scaffold_828_12
RIFOXYB2_FULL_Peregrinibacteria_32_7_curated, Peregrinibacteria, Bacteria

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comp(17777..19216)
-----------------
DNA (1440bp)
protein (480aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFOXYB2_FULL_Peregrinibacteria_32_7_curated
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase id=2916258 bin=GWC1_CPR2_39_9 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
phosphoenolpyruvate synthase
rifcsphigho2_01_scaffold_828_13
unknown

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comp(19209..20117)
-----------------
DNA (909bp)
protein (303aa)

This feature has no annotations

rifcsphigho2_01_scaffold_828_14
R_OD1_Uhrbacteria_46_25, Uhrbacteria, Parcubacteria, Bacteria

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comp(20117..21733)
-----------------
DNA (1617bp)
protein (539aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_46_25_curated
phosphoenolpyruvate synthase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E054 id=3853 bin=ACD12 species=Ferroplasma acidarmanus genus=Ferroplasma taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
phosphoenolpyruvate synthase
rifcsphigho2_01_scaffold_828_15
RIFOXYC2_FULL_OD1_Magasanikbacteria_42_28_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(21730..23214)
-----------------
DNA (1485bp)
protein (495aa)
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFOXYC2_FULL_OD1_Magasanikbacteria_42_28_curated
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase n=1 Tax=uncultured bacterium RepID=K2EXD1_9BACT
rifcsphigho2_01_scaffold_828_16

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comp(23214..24752)
-----------------
DNA (1539bp)
protein (513aa)
phosphoenolpyruvate synthase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E054 id=3853 bin=ACD12 species=Ferroplasma acidarmanus genus=Ferroplasma taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase {ECO:0000313|EMBL:KKT00108.1}; TaxID=1618827 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_43_17.;"
phosphoenolpyruvate synthase
rifcsphigho2_01_scaffold_828_17
RIFOXYB1_FULL_RIF_OD1_07_40_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

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comp(24812..26335)
-----------------
DNA (1524bp)
protein (508aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFOXYB1_FULL_RIF_OD1_07_40_15_curated
phosphoenolpyruvate synthase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E054 id=3853 bin=ACD12 species=Ferroplasma acidarmanus genus=Ferroplasma taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
phosphoenolpyruvate synthase
rifcsphigho2_01_scaffold_828_18
RIFOXYB2_FULL_Peregrinibacteria_32_7_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(26336..27817)
-----------------
DNA (1482bp)
protein (494aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFOXYB2_FULL_Peregrinibacteria_32_7_curated
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase id=2916258 bin=GWC1_CPR2_39_9 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
phosphoenolpyruvate synthase
rifcsphigho2_01_scaffold_828_19
unknown

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28026..28532
-----------------
DNA (507bp)
protein (169aa)

This feature has no annotations

rifcsphigho2_01_scaffold_828_20
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(28504..29151)
-----------------
DNA (648bp)
protein (216aa)
Bacterio-opsin activator-like protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPD6_9EURY
Bacterioopsin activator HTH domain-containing protein Tax=RBG_13_Pacearchaeota_36_9_curated
Bacterio-opsin activator domain-containing protein
rifcsphigho2_01_scaffold_828_21
RHI_OD1_Magasanikbacteria_41_16, Magasanikbacteria, Parcubacteria, Bacteria

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comp(29164..30612)
-----------------
DNA (1449bp)
protein (483aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFCSPHIGHO2_12_FULL_OD1_Magasanikbacteria_41_16_curated
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-J16 RepID=UPI00037BE64F
rifcsphigho2_01_scaffold_828_22
CG_Micra_01, Micraarchaeota, Archaea

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comp(30670..32817)
-----------------
DNA (2148bp)
protein (716aa)
amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14] Tax=CG_Micra_01
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
amidophosphoribosyltransferase n=1 Tax=Treponema bryantii RepID=UPI0003B579CF
rifcsphigho2_01_scaffold_828_23
unknown

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32941..34149
-----------------
DNA (1209bp)
protein (403aa)

This feature has no annotations

rifcsphigho2_01_scaffold_828_24
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(34146..36362)
-----------------
DNA (2217bp)
protein (739aa)
phosphoribosylformylglycinamidine synthase 2 (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RBG_16_Bathyarchaeota_48_13_curated
purL; Phosphoribosylformylglycinamidine synthase 2 (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Methanobacterium sp. MB1 RepID=U6ECX7_9EURY rbh
rifcsphigho2_01_scaffold_828_25
unknown

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comp(36359..36544)
-----------------
DNA (186bp)
protein (62aa)

This feature has no annotations

rifcsphigho2_01_scaffold_828_26

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comp(36546..37262)
-----------------
DNA (717bp)
protein (239aa)
phosphoribosylformylglycinamidine synthase I (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=uncultured archaeon W5-61a RepID=H9BX94_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKN67847.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rifcsphigho2_01_scaffold_828_27

Not on your lists

comp(37310..37573)
-----------------
DNA (264bp)
protein (88aa)
Putative phosphoribosylformylglycinamidine synthase PurS n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFC8_NITGG
Uncharacterized protein {ECO:0000313|EMBL:KKM83745.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
purS; putative phosphoribosylformylglycinamidine synthase PurS
rifcsphigho2_01_scaffold_828_28
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

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comp(37681..38571)
-----------------
DNA (891bp)
protein (297aa)
Nicotinate-nucleotide pyrophosphorylase [carboxylating] {ECO:0000256|PIRNR:PIRNR006250}; EC=2.4.2.19 {ECO:0000256|PIRNR:PIRNR006250};; Quinolinate phosphoribosyltransferase [decarboxylating] {ECO:0000
Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TY60_METKA
NadC; nicotinate-nucleotide pyrophosphorylase
rifcsphigho2_01_scaffold_828_29
CG_Micra_04, Micraarchaeota, Archaea

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38629..39216
-----------------
DNA (588bp)
protein (196aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI00035EC218
multiple antibiotic resistance (MarC)-like protein; K05595 multiple antibiotic resistance protein Tax=CG_Micra_04
transporter protein
rifcsphigho2_01_scaffold_828_30
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

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39220..40011
-----------------
DNA (792bp)
protein (264aa)
HD domain protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IE16_ACIB4
HD domain protein {ECO:0000313|EMBL:EDY35506.1}; TaxID=439481 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum boonei (strain DSM 19572 / T469).;"
metal dependent phosphohydrolase
Displaying items 1-30 of 44 in total

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