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rifcsphigho2_01_scaffold_2670_26

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Micrarchaeota_51_11

partial RP 31 / 55 MC: 4 BSCG 5 / 51 ASCG 30 / 38 MC: 1
Location: comp(42001..42603)

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex component Rrp4 n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W2Y9_UNCMA similarity UNIREF
DB: UNIREF100
  • Identity: 42.1
  • Coverage: 214.0
  • Bit_score: 151
  • Evalue 1.20e-33
exosome complex RNA-binding protein Rrp4; K03679 exosome complex component RRP4 Tax=CG_Micra_06 similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 197.0
  • Bit_score: 223
  • Evalue 2.00e-55
exosome complex RNA-binding protein Rrp4 similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 214.0
  • Bit_score: 151
  • Evalue 3.30e-34

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Taxonomy

CG_Micra_06 → Micraarchaeota → Archaea

Sequences

DNA sequence
Length: 603
ATGAACGAAATATACGTCCCCGGCGACCTGCTCTACCAGGAGCCCAAGCGGTTCGTTGGCAGCTATGTCGACAAGGGGAGCACGTTTGCGGCCGTCATCTGCACAAAATACGATGACAAGGTCGTTCCGCTGAAAGGAAAGTACCTGCCGATCCTTCAGGATTACGTTGTTGGGGTGGTTACGGAGCAACGGTTCAATGGCTACACAATCGACCTCAATTCACCCTATGAGGGCCAGCTTTCCTCGAGGGAATCTCGCGAGCCGTTCCAAGTTGGCGATGTTGTTTCCACCCTCATCCAGGATGTTGACGAGGTCAACGAGCCAATGCTGGTCGAGCCCCGGAAGCTCTATGGCGGCAGGCTTATCGAAATCGAGCCCGTCAAGATCCCCCGCGTCATCGGCCGCAACTCGAGCATGGTCACCATGATTGAAAAATTCGCCAAAAGCAAGCTTTTCGTTGGGAAGAACGGGCGGATTTACATAAAGGAGGGGGATATCGCCCTTGCCGCAATGGCGATCCTGAAAATCTCCAAGGAAGCTCACACGCACGGCCTAACCGATAGGGTGCAGGCATTCCTCGAGGCCGAAAGCAAGCGTATTTGA
PROTEIN sequence
Length: 201
MNEIYVPGDLLYQEPKRFVGSYVDKGSTFAAVICTKYDDKVVPLKGKYLPILQDYVVGVVTEQRFNGYTIDLNSPYEGQLSSRESREPFQVGDVVSTLIQDVDEVNEPMLVEPRKLYGGRLIEIEPVKIPRVIGRNSSMVTMIEKFAKSKLFVGKNGRIYIKEGDIALAAMAILKISKEAHTHGLTDRVQAFLEAESKRI*