ggKbase home page

rifcsphigho2_01_scaffold_3428_42

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Micrarchaeota_51_11

partial RP 31 / 55 MC: 4 BSCG 5 / 51 ASCG 30 / 38 MC: 1
Location: comp(44424..45395)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RL3_METKA similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 308.0
  • Bit_score: 271
  • Evalue 1.20e-69
rpl3p; 50S ribosomal protein L3P; K02906 large subunit ribosomal protein L3 Tax=CG_Micra_06 similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 320.0
  • Bit_score: 340
  • Evalue 2.40e-90
rpl3p; 50S ribosomal protein L3P similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 308.0
  • Bit_score: 271
  • Evalue 3.50e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Micra_06 → Micraarchaeota → Archaea

Sequences

DNA sequence
Length: 972
ATGGGAGATAAGGGTCCAAGGAGGGGTTCGCTGGCATATTGGCGACGGAAGCGCGCGCCAAAACTAGTCCCTAGGATCCGCGCTTGGGCGTATTCAGGGAAGGGGCTGCAGGGATTCCTGGCATACAAGGCGGGGATGGGCCAGGTGCTCATGATTGAGGATTCCGAATCCCCGTTCAAGAATCAGGAGGTTGCAAAGGCAGTGACCGTCCTCGAGGCCCCGCCGATGTACGTTTATGCAATAACCGCTTATGAAGACACGCCCAATGGCCTTAAGAAAATTGCTGAAGTGCCTGCGATGAACGCCCCAAAGGAGCTGGGGCGAACCGTTACCGTTGCCAAAAAAGCCAAATTCAAATTGGAAAATTTCCACAACCGCCCGCTTGCCGATGTGAGGGCGCTCGTCGCTACCCAGCCCTGGAAGGCGGGGCTCAAGAAAACGCCCGAAATTGCGGAAATCGGGATTGCCGGCAAGGACACGGTTGAGAAAATGGCATTTGCCAAGGAAATCCTCGGGAAGGAAGTTCGGGCAAGCGATGTGCTTGCGGACGGGGAATTCGTGGATGCAGTCGGGGTCACAAAAGGGCATGGCTGGCAGGGGATCGTTAAAAGGTTTGGGGTTGCGCTTGGGCCGCATAAGGCAACCCAGCGAAGAAGGCGCGGAGGGAGCATCGGGCCTGAAACCCAGGGCAAGGTCATGTACACCATCCCAAGGGCCGGGCAGATGGGCTTCCACAGAAGGACGGAGAGCAATAAGCGGATCCTCAAAATAGGCGAAGCTGGAAAGTCAAGCGAGGCAACGCCGGCTGGGGGATTCATTGACTACGGCAATATCGCATCAGATTTTCTTATTATCGAGGGAAGCGTCCAAGGGCCAGAGAAGAGGGTGCTCCTGCTCCGCAAGAATTACCAGAAAATTGCAACGCGCAAAGCGGATGTGAGGGCGCTTTTGTTCAATGCAAAAAAAGCGTAA
PROTEIN sequence
Length: 324
MGDKGPRRGSLAYWRRKRAPKLVPRIRAWAYSGKGLQGFLAYKAGMGQVLMIEDSESPFKNQEVAKAVTVLEAPPMYVYAITAYEDTPNGLKKIAEVPAMNAPKELGRTVTVAKKAKFKLENFHNRPLADVRALVATQPWKAGLKKTPEIAEIGIAGKDTVEKMAFAKEILGKEVRASDVLADGEFVDAVGVTKGHGWQGIVKRFGVALGPHKATQRRRRGGSIGPETQGKVMYTIPRAGQMGFHRRTESNKRILKIGEAGKSSEATPAGGFIDYGNIASDFLIIEGSVQGPEKRVLLLRKNYQKIATRKADVRALLFNAKKA*