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rifcsphigho2_01_scaffold_6884

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_6884_1
unknown

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34..1029
DNA (996bp) protein (332aa)

This feature has no annotations

rifcsphigho2_01_scaffold_6884_2
R_WOR_2_68_15, WOR-2, Bacteria

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comp(1053..1448)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PL67_9ZZZZ
Putative uncharacterized protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
rifcsphigho2_01_scaffold_6884_3
unknown

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comp(1445..1753)
DNA (309bp) protein (103aa)

This feature has no annotations

rifcsphigho2_01_scaffold_6884_4

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comp(1780..2625)
DNA (846bp) protein (282aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160314}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160312};; TaxID=1457870 species="Archa
D-tyrosyl-tRNA(Tyr) deacylase id=4541657 bin=PER_GWC2_41_7 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
rifcsphigho2_01_scaffold_6884_5
AR11, Woesearchaeaota, DPANN, Archaea

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2760..2939
DNA (180bp) protein (60aa)
id=4541659 bin=PER_GWC2_41_7 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Tax=AR11
rifcsphigho2_01_scaffold_6884_6
AR11, Woesearchaeaota, DPANN, Archaea

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3086..3421
DNA (336bp) protein (112aa)
id=5043594 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR11
rifcsphigho2_01_scaffold_6884_7
AR11, Woesearchaeaota, DPANN, Archaea

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3425..6055
DNA (2631bp) protein (877aa)
cation-transporting ATPase; K01537 Ca2+-transporting ATPase [EC:3.6.3.8] Tax=AR11
cation-transporting ATPase A (EC:3.6.3.10)
Cation-transporting ATPase A, P type (ATPase, E1-E2 type) id=5800624 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_6884_8
AR11, Woesearchaeaota, DPANN, Archaea

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6081..8048
DNA (1968bp) protein (656aa)
histone acetyltransferase, ELP3 family (EC:2.3.1.48)
Histone acetyltransferase, ELP3 family Tax=AR11
Histone acetyltransferase Elp3 like protein id=5800668 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_6884_9
AR11, Woesearchaeaota, DPANN, Archaea

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8050..9003
DNA (954bp) protein (318aa)
RNA methylase, NOL1/NOP2/sun family Tax=AR11
tRNA (Cytosine-48,49-C(5)-) methyltransferase id=5800672 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA methylase, NOL1/NOP2/sun family
rifcsphigho2_01_scaffold_6884_10
unknown

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9029..9451
DNA (423bp) protein (141aa)

This feature has no annotations

rifcsphigho2_01_scaffold_6884_11
AR11, Woesearchaeaota, DPANN, Archaea

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comp(9460..10077)
DNA (618bp) protein (206aa)
Transcription factor E Tax=AR11
transcription factor E; K03136 transcription initiation factor TFIIE subunit alpha id=5041815 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Transcription factor E
rifcsphigho2_01_scaffold_6884_12
AR11, Woesearchaeaota, DPANN, Archaea

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10364..10783
DNA (420bp) protein (140aa)
NUDIX hydrolase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUG2_9ARCH
Uncharacterized protein Tax=AR11
NTP pyrophosphohydrolase
rifcsphigho2_01_scaffold_6884_13

Not on your lists

10799..11716
DNA (918bp) protein (306aa)
Carbamate kinase n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IGT0_ACIB4 id=5103487 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Carbamate kinase
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_6884_14

Not on your lists

11776..13491
DNA (1716bp) protein (572aa)
DNA polymerase beta family {ECO:0000313|EMBL:KHO53091.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
PHP domain protein id=4935158 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
PHP domain-containing protein
rifcsphigho2_01_scaffold_6884_15
CG_Woesearch_01, Woesearchaeota, Archaea

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13531..14523
DNA (993bp) protein (331aa)
glyceraldehyde-3-phosphate dehydrogenase, type I; K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] Tax=CG_Woesearch_01
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] id=5045844 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
rifcsphigho2_01_scaffold_6884_16
unknown

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14541..14864
DNA (324bp) protein (108aa)

This feature has no annotations

rifcsphigho2_01_scaffold_6884_17

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14910..15914
DNA (1005bp) protein (335aa)
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
Probable tRNA pseudouridine synthase D id=5799863 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Putative tRNA pseudouridine synthase D {ECO:0000313|EMBL:AJF61194.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsphigho2_01_scaffold_6884_18
RIFOXYB2_FULL_Elusimicrobia_49_7_curated, Elusimicrobia, Bacteria

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comp(15883..16536)
DNA (654bp) protein (218aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFOXYB2_FULL_Elusimicrobia_49_7_curated
adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Roseburia sp. CAG:100 RepID=R7R3W8_9FIRM
rifcsphigho2_01_scaffold_6884_19
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16538..17011)
DNA (474bp) protein (158aa)
hypothetical protein
id=5103004 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsphigho2_01_scaffold_6884_20

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17287..17553
DNA (267bp) protein (89aa)
Marine sediment metagenome DNA, contig: S06H3_L02280 {ECO:0000313|EMBL:GAI15546.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_01_scaffold_6884_21
unknown

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17550..17747
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying 21 items

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