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rifcsphigho2_01_scaffold_16188

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_16188_1
GWF2_OP11_38_6, Daviesbacteria, Microgenomates, Bacteria

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1..969
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003799918
Uncharacterized protein {ECO:0000313|EMBL:KKQ76423.1}; TaxID=1618432 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWF2_38_6.;"
rifcsphigho2_01_scaffold_16188_2

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comp(966..2207)
DNA (1242bp) protein (414aa)
DNA primase DnaG {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020821}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020820};; TaxID=1579371 species="Archaea.;" sourc
DNA primase id=5048471 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_01_scaffold_16188_3
unknown

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2292..2477
DNA (186bp) protein (62aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16188_4
unknown

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comp(2618..3172)
DNA (555bp) protein (185aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16188_5
AR11, Woesearchaeaota, DPANN, Archaea

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3387..4103
DNA (717bp) protein (239aa)
Putative Serine/threonine protein kinase involved in cell cycle control (EC:2.7.11.1); K07178 RIO kinase 1 [EC:2.7.11.1] Tax=AR11
Non-specific serine/threonine protein kinase; K07178 RIO kinase 1 [EC:2.7.11.1] id=5048470 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
putative serine/threonine protein kinase
rifcsphigho2_01_scaffold_16188_6

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4380..4922
DNA (543bp) protein (181aa)
Ribosomal RNA assembly protein {ECO:0000313|EMBL:KHO50505.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
KH domain protein; K06961 ribosomal RNA assembly protein id=5048469 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
putative RNA-processing protein
rifcsphigho2_01_scaffold_16188_7
AR11, Woesearchaeaota, DPANN, Archaea

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4924..6582
DNA (1659bp) protein (553aa)
DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] Tax=AR11
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] id=5048468 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA topoisomerase VI, subunit B
rifcsphigho2_01_scaffold_16188_8
R_Nitrospirae_40_19, Nitrospirae, Bacteria

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6554..7642
DNA (1089bp) protein (363aa)
DNA topoisomerase VI subunit A (EC:5.99.1.3); K03166 DNA topoisomerase VI subunit A [EC:5.99.1.3] Tax=RIFCSPHIGHO2_02_FULL_Nitrospirae_40_19_curated
DNA topoisomerase (ATP-hydrolyzing) n=4 Tax=Candidatus Parvarchaeum RepID=D2EGK9_9EURY id=5103234 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA topoisomerase ATP-hydrolyzing
rifcsphigho2_01_scaffold_16188_9
Thermoanaerobacterium xylanolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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7834..8784
DNA (951bp) protein (317aa)
Putative uncharacterized protein n=1 Tax=Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11) RepID=F6BHB1_THEXL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF17584.1}; TaxID=858215 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaeroba
rifcsphigho2_01_scaffold_16188_10

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comp(9324..9698)
DNA (375bp) protein (125aa)
id=5047509 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45718.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_01_scaffold_16188_11
unknown

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comp(9725..10708)
DNA (984bp) protein (328aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16188_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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11008..11259
DNA (252bp) protein (84aa)
id=5041829 Tax=RBG_16_Euryarchaeota_68_12_curated
id=5041829 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_16188_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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11262..11603
DNA (342bp) protein (114aa)
Transcription regulator AbrB/SpoV, predicted Tax=RBG_16_Euryarchaeota_68_12_curated
Transcription regulator AbrB/SpoV, predicted id=5041830 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_16188_14
CG_Woesearch_02, Woesearchaeota, Archaea

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11643..13529
DNA (1887bp) protein (629aa)
DNA repair helicase rad3 Tax=CG_Woesearch_02
ATP dependent helicase id=5799755 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ATP dependent helicase
rifcsphigho2_01_scaffold_16188_15
AR10, Diapherotrites, DPANN, Archaea

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13589..13819
DNA (231bp) protein (77aa)
hypothetical protein
AbrB/MazE/MraZ-like id=5240974 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
AbrB/MazE/MraZ-like Tax=AR10
rifcsphigho2_01_scaffold_16188_16

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13822..14181
DNA (360bp) protein (120aa)
PIN protein
PIN domain-containing protein id=5240975 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
PIN protein {ECO:0000313|EMBL:AJF59966.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_01_scaffold_16188_17
unknown

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comp(14242..14976)
DNA (735bp) protein (245aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16188_18
GWA2_OP11_40_7b, Woesebacteria, Microgenomates, Bacteria

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comp(15150..15329)
DNA (180bp) protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR73123.1}; TaxID=1618562 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA2_40_7.;"
Displaying 18 items

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