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rifcsphigho2_01_scaffold_14358

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_14358_1
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

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282..1064
-----------------
DNA (783bp)
protein (261aa)
Integrase family protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TBG9_ACIB4
integrase family protein
Site-specific recombinase, phage integrase family protein {ECO:0000313|EMBL:EDY35229.1}; TaxID=439481 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum boonei (strain DSM 1
rifcsphigho2_01_scaffold_14358_2
GWB1_OD1_43_7, Nomurabacteria, Parcubacteria, Bacteria

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comp(1110..1730)
-----------------
DNA (621bp)
protein (207aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT18609.1}; TaxID=1618747 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_43_7.;"
hypothetical protein id=7201902 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
rifcsphigho2_01_scaffold_14358_3
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2037..3092
-----------------
DNA (1056bp)
protein (352aa)
SAM-dependent methyltransferase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12TC9_METBU
methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:ABE53297.1}; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methano
rifcsphigho2_01_scaffold_14358_4
unknown

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3180..3695
-----------------
DNA (516bp)
protein (172aa)

This feature has no annotations

rifcsphigho2_01_scaffold_14358_5
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3745..4479)
-----------------
DNA (735bp)
protein (245aa)
Methyltransferase family protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LT19_CLOCD
methyltransferase family protein
Methyltransferase family protein {ECO:0000313|EMBL:AEV67223.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clarifl
rifcsphigho2_01_scaffold_14358_6
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

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comp(4499..5509)
-----------------
DNA (1011bp)
protein (337aa)
dimethyladenosine transferase (EC:2.1.1.48); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_25_curated
dimethyladenosine transferase (EC:2.1.1.48); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] id=2453 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
dimethyladenosine transferase
rifcsphigho2_01_scaffold_14358_7
unknown

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comp(5591..5833)
-----------------
DNA (243bp)
protein (81aa)

This feature has no annotations

rifcsphigho2_01_scaffold_14358_8
unknown

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comp(5838..5960)
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

rifcsphigho2_01_scaffold_14358_9

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comp(6233..11560)
-----------------
DNA (5328bp)
protein (1776aa)
APHP protein {ECO:0000313|EMBL:AJF61959.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
APHP domain-containing protein id=5800628 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_14358_10
unknown

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comp(11580..11906)
-----------------
DNA (327bp)
protein (109aa)

This feature has no annotations

rifcsphigho2_01_scaffold_14358_11
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(12492..13562)
-----------------
DNA (1071bp)
protein (357aa)
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=CG_Woesearch_01
Cell division protein FtsZ id=5799752 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Cell division protein FtsZ
rifcsphigho2_01_scaffold_14358_12
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(13974..14765)
-----------------
DNA (792bp)
protein (264aa)
nitroreductase Tax=CG_Woesearch_02
Nitroreductase id=5799753 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
nitroreductase
rifcsphigho2_01_scaffold_14358_13
AR5, Aenigmarchaeota, DPANN, Archaea

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comp(14997..15494)
-----------------
DNA (498bp)
protein (166aa)
alias=gwa2_scaffold_192_118 id=18248107 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
alias=gwa2_scaffold_192_118 Tax=AR5
rifcsphigho2_01_scaffold_14358_14
AR9, Woesearchaeaota, DPANN, Archaea

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comp(15586..16371)
-----------------
DNA (786bp)
protein (262aa)
Tax=AR9
rifcsphigho2_01_scaffold_14358_15
CG_Pacearch_06, Pacearchaeota, Archaea

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16710..18263
-----------------
DNA (1554bp)
protein (518aa)
prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=CG_Pacearch_06
Bifunctional aminoacyl-tRNA synthetase (Fragment) id=5800815 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Proline-tRNA ligase
rifcsphigho2_01_scaffold_14358_16
unknown

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comp(18416..18982)
-----------------
DNA (567bp)
protein (189aa)

This feature has no annotations

rifcsphigho2_01_scaffold_14358_17

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comp(19145..19750)
-----------------
DNA (606bp)
protein (202aa)
30S ribosomal protein S2 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS2_NANEQ id=5102942 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S2 {ECO:0000256|SAAS:SAAS00084186}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
30S ribosomal protein S2
rifcsphigho2_01_scaffold_14358_18
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(20055..20585)
-----------------
DNA (531bp)
protein (177aa)
hypothetical protein
Putative uncharacterized protein id=4759182 bin=PER_GWC2_41_7 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Putative uncharacterized protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_14358_19
Methanobacterium sp. Maddingley MBC34, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(20578..21186)
-----------------
DNA (609bp)
protein (203aa)
hypothetical protein
Nucleotidyltransferase family protein id=4759180 bin=PER_GWC2_41_7 species=Methanobacterium sp. Maddingley MBC34 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Nucleotidyltransferase family protein {ECO:0000313|EMBL:EKQ52051.1}; TaxID=1220534 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source
rifcsphigho2_01_scaffold_14358_20
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(21265..21681)
-----------------
DNA (417bp)
protein (139aa)
Mutator mutT protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7Z7_9FIRM
Mutator mutT protein Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsphigho2_01_scaffold_14358_21
unknown

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comp(21744..22172)
-----------------
DNA (429bp)
protein (143aa)

This feature has no annotations

Displaying 21 items

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