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rifcsphigho2_01_scaffold_16059

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_16059_1
unknown

Not on your lists

comp(301..759)
-----------------
DNA (459bp)
protein (153aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16059_2
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(766..1836)
-----------------
DNA (1071bp)
protein (357aa)
pepP; aminopeptidase; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=AR9
Xaa-Pro dipeptidase n=1 Tax=Bryantella formatexigens DSM 14469 RepID=C6LM95_9FIRM id=36210 bin=ACD30 species=Marvinbryantia formatexigens genus=Marvinbryantia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
peptidase M24
rifcsphigho2_01_scaffold_16059_3
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

1933..3141
-----------------
DNA (1209bp)
protein (403aa)
processing peptidase (EC:3.4.24.64) Tax=AR9
processing peptidase (EC:3.4.24.64) id=5041801 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
M16 family peptidase (EC:3.4.24.-)
rifcsphigho2_01_scaffold_16059_4
R_OD1_Nomurabacteria_33_24, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3429..4013
-----------------
DNA (585bp)
protein (195aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_33_24_curated
rifcsphigho2_01_scaffold_16059_5
unknown

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4128..4535
-----------------
DNA (408bp)
protein (136aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16059_6
CG_Woesearch_02, Woesearchaeota, Archaea

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4540..4980
-----------------
DNA (441bp)
protein (147aa)
lipoprotein signal peptidase (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36] Tax=CG_Woesearch_02
Lipoprotein signal peptidase n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K946_HALHC
lipoprotein signal peptidase
rifcsphigho2_01_scaffold_16059_7
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(5002..5703)
-----------------
DNA (702bp)
protein (234aa)
Tax=CG_Woesearch_02
rifcsphigho2_01_scaffold_16059_8
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(6101..6418)
-----------------
DNA (318bp)
protein (106aa)
translation initiation factor eIF-1A; K03236 translation initiation factor 1A id=5048850 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
translation initiation factor IF-1; K03236 translation initiation factor 1A Tax=RBG_13_Woesearchaeota_36_6_curated
Translation initiation factor 1A
rifcsphigho2_01_scaffold_16059_9
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6586..6969
-----------------
DNA (384bp)
protein (128aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W4H8_UNCMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ36715.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae
rifcsphigho2_01_scaffold_16059_10
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6942..7268
-----------------
DNA (327bp)
protein (109aa)
Predicted nucleotidyltransferase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W4H7_UNCMA
nucleotidyltransferase
Predicted nucleotidyltransferase {ECO:0000313|EMBL:CAJ36716.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella a
rifcsphigho2_01_scaffold_16059_11
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7292..7987
-----------------
DNA (696bp)
protein (232aa)
ribosomal large subunit pseudouridine synthase B (EC:5.4.99.-)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Aceto
Pseudouridine synthase n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QRP0_ACEAZ
rifcsphigho2_01_scaffold_16059_12
unknown

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8180..8320
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16059_13
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

8351..8983
-----------------
DNA (633bp)
protein (211aa)
DNA polymerase beta domain-containing protein region id=5041659 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA polymerase beta domain-containing protein region Tax=AR4
rifcsphigho2_01_scaffold_16059_14
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

8971..9570
-----------------
DNA (600bp)
protein (200aa)
HEPN id=5041660 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
HEPN Tax=AR4
rifcsphigho2_01_scaffold_16059_15
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

9584..18838
-----------------
DNA (9255bp)
protein (3085aa)
Member of asn/thr-rich large protein family n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NHS0_METST
Putative uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
putative membrane-anchored cell surface protein
rifcsphigho2_01_scaffold_16059_16
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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18831..25814
-----------------
DNA (6984bp)
protein (2328aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEW6_9ZZZZ
Putative uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
rifcsphigho2_01_scaffold_16059_17
unknown

Not on your lists

25907..26347
-----------------
DNA (441bp)
protein (147aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16059_18

Not on your lists

comp(26351..26695)
-----------------
DNA (345bp)
protein (115aa)
hypothetical protein id=5041689 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO47941.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
rifcsphigho2_01_scaffold_16059_19
RIFOXYC1_FULL_RIF_OD1_06_38_18_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(26692..26979)
-----------------
DNA (288bp)
protein (96aa)
DNA polymerase beta domain protein region n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RGU2_METVM
DNA polymerase beta domain-containing protein region; K07075 Tax=RIFOXYC1_FULL_RIF_OD1_06_38_18_curated
DNA polymerase beta domain-containing protein
rifcsphigho2_01_scaffold_16059_20
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(27053..27568)
-----------------
DNA (516bp)
protein (172aa)
Ribosomal protein L16 Tax=AR11
50S ribosomal protein L16; K02866 large subunit ribosomal protein L10e id=5044620 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rplP; 50S ribosomal protein L16
rifcsphigho2_01_scaffold_16059_21
R_RIF_OD1_07_41_9, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(27626..28402)
-----------------
DNA (777bp)
protein (259aa)
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_07_41_9_curated
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036744AE
pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit
rifcsphigho2_01_scaffold_16059_22

Not on your lists

comp(28483..30144)
-----------------
DNA (1662bp)
protein (554aa)
2-oxoglutarate ferredoxin oxidoreductase subunit alpha {ECO:0000313|EMBL:KHO50808.1}; EC=1.2.7.3 {ECO:0000313|EMBL:KHO50808.1};; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
Pyruvate:ferredoxin oxidoreductase n=1 Tax=nanoarchaeote Nst1 RepID=R1G912_9ARCH
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
rifcsphigho2_01_scaffold_16059_23
Methanothermococcus okinawensis, Methanothermococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(30272..32056)
-----------------
DNA (1785bp)
protein (595aa)
ATP-dependent DNA helicase Hel308 {ECO:0000256|HAMAP-Rule:MF_00442}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00442};; TaxID=647113 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methan
Putative ski2-type helicase n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8AJR7_METOI
ski2-type helicase
rifcsphigho2_01_scaffold_16059_24
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

32171..32635
-----------------
DNA (465bp)
protein (155aa)
hypothetical protein Tax=AR19
Displaying 24 items

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