ggKbase home page

rifcsphigho2_01_scaffold_16341

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_16341_1
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(60..1085)
-----------------
DNA (1026bp)
protein (342aa)
Uncharacterized protein n=1 Tax=Bacillus cereus AND1407 RepID=J7UAF4_BACCE
Uncharacterized protein {ECO:0000313|EMBL:KKG64488.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina maze
rifcsphigho2_01_scaffold_16341_2

Not on your lists

comp(1149..1862)
-----------------
DNA (714bp)
protein (238aa)
Carbohydrate kinase, YjeF related protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GWS8_METFV
Marine sediment metagenome DNA, contig: S01H1_S30658 {ECO:0000313|EMBL:GAG32627.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
carbohydrate kinase
rifcsphigho2_01_scaffold_16341_3
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

2020..2868
-----------------
DNA (849bp)
protein (283aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
rifcsphigho2_01_scaffold_16341_4
unknown

Not on your lists

2849..3184
-----------------
DNA (336bp)
protein (112aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16341_5
unknown

Not on your lists

3343..3723
-----------------
DNA (381bp)
protein (127aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16341_6
Lactococcus garvieae, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3711..4118)
-----------------
DNA (408bp)
protein (136aa)
acid phosphatase n=1 Tax=Lactococcus garvieae RepID=UPI00037D1EFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK59681.1}; TaxID=420890 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus garvieae (strain Lg2)
rifcsphigho2_01_scaffold_16341_7
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

4402..5619
-----------------
DNA (1218bp)
protein (406aa)
hypothetical protein; K02004 putative ABC transport system permease protein Tax=CG_Pacearch_04
hypothetical protein; K02004 putative ABC transport system permease protein id=5046030 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_01_scaffold_16341_8
unknown

Not on your lists

comp(5773..6567)
-----------------
DNA (795bp)
protein (265aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16341_9
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

6715..7455
-----------------
DNA (741bp)
protein (247aa)
transcriptional regulator TrmB id=5046026 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
transcriptional regulator TrmB Tax=AR4
Transcriptional regulator, TrmB
rifcsphigho2_01_scaffold_16341_10
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7626..8336
-----------------
DNA (711bp)
protein (237aa)
ABC transporter, ATPase subunit n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12US7_METBU
ABC transporter, ATPase subunit
ABC transporter, ATPase subunit {ECO:0000313|EMBL:ABE52799.1}; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methano
rifcsphigho2_01_scaffold_16341_11
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(8347..9114)
-----------------
DNA (768bp)
protein (256aa)
Myo-inositol-monophosphatase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AIH1_IGNAJ
Myo-inositol-monophosphatase
Myo-inositol-monophosphatase {ECO:0000313|EMBL:AFH48778.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibac
rifcsphigho2_01_scaffold_16341_12
unknown

Not on your lists

comp(9176..9370)
-----------------
DNA (195bp)
protein (65aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16341_13
unknown

Not on your lists

comp(9769..10638)
-----------------
DNA (870bp)
protein (290aa)

This feature has no annotations

Displaying 13 items

View Taxonomy