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rifcsphigho2_01_scaffold_16488

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_16488_1
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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119..529
-----------------
DNA (411bp)
protein (137aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FWM0_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EIA07099.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobact
MutT/nudix family protein
rifcsphigho2_01_scaffold_16488_2
Methanococcus maripaludis, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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706..1038
-----------------
DNA (333bp)
protein (111aa)
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) RepID=A9A8M1_METM6
methylated-DNA--protein-cysteine methyltransferase
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:ABX01694.1}; TaxID=444158 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source
rifcsphigho2_01_scaffold_16488_3
OP11_GWA2_32_13, Roizmanbacteria, Microgenomates, Bacteria

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1042..1467
-----------------
DNA (426bp)
protein (142aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23] id=130376 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000313|EMBL:KKP33434.1}; TaxID=1618475 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_32_13.
rifcsphigho2_01_scaffold_16488_4
GWE2_OD1_45_35, Uhrbacteria, Parcubacteria, Bacteria

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1624..2646
-----------------
DNA (1023bp)
protein (341aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A8P8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKU08309.1}; TaxID=1618993 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWE2_45_35.;"
rifcsphigho2_01_scaffold_16488_5
RHI_OP11_Gottemanbacteria_40_13, Gottesmanbacteria, Microgenomates, Bacteria

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2728..2979
-----------------
DNA (252bp)
protein (84aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WLW7_9EURY
hypothetical protein
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_OP11_Gottemanbacteria_40_13_curated
rifcsphigho2_01_scaffold_16488_6
unknown

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comp(3036..3371)
-----------------
DNA (336bp)
protein (112aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16488_7
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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comp(3406..4854)
-----------------
DNA (1449bp)
protein (483aa)
putative thymidine phosphorylase (TdRPase) (EC:2.4.2.4) Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
AMP phosphohydrolase; K00758 thymidine phosphorylase [EC:2.4.2.4] id=5043588 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
AMP phosphorylase
rifcsphigho2_01_scaffold_16488_8
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4977..5720)
-----------------
DNA (744bp)
protein (248aa)
glucose-1-phosphate thymidylyltransferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] Tax=AR9
glmU; glucosamine-1-phosphate N-acetyltransferase (EC:2.3.1.157 2.7.7.23); K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] id=5050191 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
nucleotidyl transferase
rifcsphigho2_01_scaffold_16488_9
R_Chlamydiae_49_12, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(5785..6462)
-----------------
DNA (678bp)
protein (226aa)
Predicted hydrolase (HAD superfamily) n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L9S6_SIMNZ
putative hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=RIFCSPLOWO2_02_FULL_Chlamydiae_49_12_curated
putative hydrolase
rifcsphigho2_01_scaffold_16488_10

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comp(6499..7269)
-----------------
DNA (771bp)
protein (257aa)
Putative gluconeogenesis factor n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L9S7_SIMNZ
Uncharacterized protein {ECO:0000313|EMBL:KHO48937.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
hypothetical protein
rifcsphigho2_01_scaffold_16488_11
GWC2_CPR2_39_10, CPR2, Bacteria

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comp(7269..7424)
-----------------
DNA (156bp)
protein (52aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ95055.1}; TaxID=1618345 species="Bacteria; candidate division CPR2.;" source="candidate division CPR2 bacterium GW2011_GWC2_39_10.;"
rifcsphigho2_01_scaffold_16488_12
unknown

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7629..9464
-----------------
DNA (1836bp)
protein (612aa)
Fused permease/ATPase component of ABC transporter involved in Fe-S cluster assembly n=1 Tax=Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / CIP 78.65) RepID=H2IQX9_RAHAC id=5103740 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Fused permease/ATPase component of ABC transporter involved in Fe-S cluster assembly n=1 Tax=Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / CIP 78.65) RepID=
Fused permease/ATPase component of ABC transporter involved in Fe-S cluster assembly
rifcsphigho2_01_scaffold_16488_13

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comp(9517..9912)
-----------------
DNA (396bp)
protein (132aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PJD2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KHO52441.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
rifcsphigho2_01_scaffold_16488_14
AR13, Pacearchaeaota, DPANN, Archaea

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comp(9909..10505)
-----------------
DNA (597bp)
protein (199aa)
Transcriptional regulator Tax=AR13
hypothetical protein id=5046753 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_01_scaffold_16488_15
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(10804..11661)
-----------------
DNA (858bp)
protein (286aa)
hypothetical protein
id=5042256 Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
id=5241058 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_16488_16
unknown

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11770..12663
-----------------
DNA (894bp)
protein (298aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16488_17
unknown

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12922..13422
-----------------
DNA (501bp)
protein (167aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16488_18
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

13585..14343
-----------------
DNA (759bp)
protein (253aa)
Uncharacterized protein id=5799750 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein Tax=AR15
hypothetical protein
rifcsphigho2_01_scaffold_16488_19
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(14361..14699)
-----------------
DNA (339bp)
protein (113aa)
hypothetical protein
id=5102994 Tax=RBG_13_Pacearchaeota_36_9_curated
id=5102994 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_01_scaffold_16488_20
AR17, Woesearchaeaota, DPANN, Archaea

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comp(14687..14890)
-----------------
DNA (204bp)
protein (68aa)
hypothetical protein
hypothetical protein Tax=AR17
id=5102995 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_01_scaffold_16488_21
unknown

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comp(14960..15655)
-----------------
DNA (696bp)
protein (232aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16488_22
R_OD1_Azambacteria_40_24, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(15725..16870)
-----------------
DNA (1146bp)
protein (382aa)
Calcineurin-like phosphoesterase family protein n=1 Tax=Bacteriovorax sp. BAL6_X RepID=T0DNY7_9DELT
metallophosphoesterase Tax=RIFCSPHIGHO2_01_FULL_OD1_Azambacteria_40_24_curated
hypothetical protein
rifcsphigho2_01_scaffold_16488_23
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

16975..17913
-----------------
DNA (939bp)
protein (313aa)
tRNA-dihydrouridine synthase n=2 Tax=Dorea RepID=A6BF05_9FIRM
tRNA-U20-dihydrouridine synthase Tax=CG_Pacearch_05
TIM-barrel protein, nifR3 family
Displaying 23 items

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