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rifcsphigho2_01_scaffold_4028

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_4028_1
GWC2_OD1_41_11, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

224..643
-----------------
DNA (420bp)
protein (140aa)
Uncharacterized protein n=1 Tax=Acetobacter sp. CAG:267 RepID=R5YQ54_9PROT
Conserved hypothetical membrane protein, DUF6 family {ECO:0000313|EMBL:KKR87433.1}; TaxID=1618985 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWC2_41_11.;"
hypothetical protein
rifcsphigho2_01_scaffold_4028_2
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1057..1305)
-----------------
DNA (249bp)
protein (83aa)
hypothetical protein
id=5103355 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsphigho2_01_scaffold_4028_3
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1645..2298)
-----------------
DNA (654bp)
protein (218aa)
hypothetical protein Tax=AR11
rifcsphigho2_01_scaffold_4028_4
RBG_13_OD1_Falkowbacteria_39_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2325..2912)
-----------------
DNA (588bp)
protein (196aa)
cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] Tax=RBG_13_OD1_Falkowbacteria_39_9_curated
cytidylate kinase (EC:2.7.4.14)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EZB6_9BACT
rifcsphigho2_01_scaffold_4028_5
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

comp(3117..3929)
-----------------
DNA (813bp)
protein (271aa)
Glycosyl transferase family 2 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XH86_9BACT
glycosyl transferase Tax=GWA2_WOR_2_47_8_curated
putative glycosyltransferase
rifcsphigho2_01_scaffold_4028_6
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4117..5199)
-----------------
DNA (1083bp)
protein (361aa)
hypothetical protein
id=5041678 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
rifcsphigho2_01_scaffold_4028_7
unknown

Not on your lists

5323..5721
-----------------
DNA (399bp)
protein (133aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4028_8
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(5724..6239)
-----------------
DNA (516bp)
protein (172aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B0099
hypothetical protein
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
rifcsphigho2_01_scaffold_4028_9
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(6362..6967)
-----------------
DNA (606bp)
protein (202aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035E6099
Nucleotidyltransferase family protein
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
rifcsphigho2_01_scaffold_4028_10

Not on your lists

7485..8153
-----------------
DNA (669bp)
protein (223aa)
peptidyl-prolyl cis-trans isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] id=5043665 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Peptidyl-prolyl cis-trans isomerase
rifcsphigho2_01_scaffold_4028_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

8281..9603
-----------------
DNA (1323bp)
protein (441aa)
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=CG_Woesearch_02
Cell division protein FtsZ id=5800713 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Cell division protein FtsZ
rifcsphigho2_01_scaffold_4028_12
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

9749..9955
-----------------
DNA (207bp)
protein (69aa)
secE; preprotein translocase subunit SecE; K07342 protein transport protein SEC61 subunit gamma and related proteins Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
secE; preprotein translocase subunit SecE; K07342 protein transport protein SEC61 subunit gamma and related proteins id=5043663 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_01_scaffold_4028_13
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


10018..10497
-----------------
DNA (480bp)
protein (160aa)
transcription antitermination protein NusG Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=5043662 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
LSU ribosomal protein L24A Rpl24A
rifcsphigho2_01_scaffold_4028_14
unknown

Not on your lists

comp(10656..11438)
-----------------
DNA (783bp)
protein (261aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4028_15
Microgenomates bacterium GW2011_GWC1_39_12, Microgenomates, Bacteria

Not on your lists

comp(11539..12219)
-----------------
DNA (681bp)
protein (227aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR01798.1}; TaxID=1618514 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_39_12.;"
id=4761605 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_01_scaffold_4028_16
unknown

Not on your lists

12714..12926
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4028_17
unknown

Not on your lists

13060..13368
-----------------
DNA (309bp)
protein (103aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4028_18
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13388..14650)
-----------------
DNA (1263bp)
protein (421aa)
MgtC family protein
MgtC family protein {ECO:0000313|EMBL:AIS30865.1}; Uncharacterized protein {ECO:0000313|EMBL:CEA13685.1}; TaxID=2162 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacter
hypothetical protein id=14425799 bin=bin1_lowGC species=Methanobacterium sp. Maddingley MBC34 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=bin1_lowGC organism_group=Unknown_CP
rifcsphigho2_01_scaffold_4028_19
GWA2_OP11_nov_42_16, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(14741..15217)
-----------------
DNA (477bp)
protein (159aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EHG1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKS41687.1}; TaxID=1618441 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA2_42_16.;"
hypothetical protein
rifcsphigho2_01_scaffold_4028_20
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(15281..16495)
-----------------
DNA (1215bp)
protein (405aa)
hypothetical protein; K02004 putative ABC transport system permease protein Tax=CG_Pacearch_04
Uncharacterized protein id=5800242 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_01_scaffold_4028_21
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(16596..17861)
-----------------
DNA (1266bp)
protein (422aa)
hypothetical protein Tax=CG_Woesearch_02
Putative uncharacterized protein id=5800241 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_4028_22
unknown

Not on your lists

18040..18783
-----------------
DNA (744bp)
protein (248aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4028_23
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18965..21034
-----------------
DNA (2070bp)
protein (690aa)
DNA mismatch repair protein MutL n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AV55_9CLOT
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisaliniba
mutL; DNA mismatch repair protein MutL
rifcsphigho2_01_scaffold_4028_24
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

Not on your lists

comp(21091..21483)
-----------------
DNA (393bp)
protein (131aa)
Fused histidine kinase/response regulator receiver domain protein n=1 Tax=Rivularia sp. PCC 7116 RepID=K9RAZ0_9CYAN
two-component hybrid sensor and regulator Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
fused histidine kinase/response regulator receiver domain-containing protein
rifcsphigho2_01_scaffold_4028_25
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21552..21977)
-----------------
DNA (426bp)
protein (142aa)
Signal-transducing histidine kinase {ECO:0000313|EMBL:EMA39965.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hame
rifcsphigho2_01_scaffold_4028_26
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(22115..23080)
-----------------
DNA (966bp)
protein (322aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATL1_9ARCH
Putative uncharacterized protein Tax=AR11
rifcsphigho2_01_scaffold_4028_27
unknown

Not on your lists

23317..23442
-----------------
DNA (126bp)
protein (42aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4028_28
R_OD1_45_15, Parcubacteria, Bacteria

Not on your lists

comp(23401..23898)
-----------------
DNA (498bp)
protein (166aa)
NUDT1; nudix (nucleoside diphosphate linked moiety X)-type motif 1; K03574 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-] Tax=RIFCSPLOWO2_01_FULL_OD1_45_15_curated
NUDIX hydrolase (Fragment) n=1 Tax=mine drainage metagenome RepID=T1BLP3_9ZZZZ
NUDIX hydrolase
rifcsphigho2_01_scaffold_4028_29
unknown

Not on your lists

23979..24443
-----------------
DNA (465bp)
protein (155aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4028_30
unknown

Not on your lists

comp(24876..26387)
-----------------
DNA (1512bp)
protein (504aa)

This feature has no annotations

Displaying items 1-30 of 64 in total

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