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rifcsphigho2_01_scaffold_4908

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_4908_1
unknown

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377..610
-----------------
DNA (234bp)
protein (78aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4908_2
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(653..1207)
-----------------
DNA (555bp)
protein (185aa)
GA15886 gene product from transcript GA15886-RA; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=AR9
ribulose-phosphate 3-epimerase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] id=5047354 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ribulose-phosphate 3-epimerase
rifcsphigho2_01_scaffold_4908_3

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comp(1284..1754)
-----------------
DNA (471bp)
protein (157aa)
ribose-5-phosphate isomerase B; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] id=5047355 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:KHO54133.1}; EC=5.3.1.6 {ECO:0000313|EMBL:KHO54133.1};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rpiB; Ribose 5-phosphate isomerase (EC:5.3.1.26)
rifcsphigho2_01_scaffold_4908_4
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

1914..3968
-----------------
DNA (2055bp)
protein (685aa)
Tax=AR9
rifcsphigho2_01_scaffold_4908_5
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

4176..5072
-----------------
DNA (897bp)
protein (299aa)
transmembrane_regions id=5041790 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
rifcsphigho2_01_scaffold_4908_6

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5220..7559
-----------------
DNA (2340bp)
protein (780aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B9784
Marine sediment metagenome DNA, contig: S01H1_S33701 {ECO:0000313|EMBL:GAG36895.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsphigho2_01_scaffold_4908_7
unknown

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7660..8121
-----------------
DNA (462bp)
protein (154aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4908_8
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8143..8727)
-----------------
DNA (585bp)
protein (195aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=583346 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
Superoxide dismutase n=2 Tax=Clostridium kluyveri RepID=A5N2T8_CLOK5
hypothetical protein
rifcsphigho2_01_scaffold_4908_9
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8861..9499)
-----------------
DNA (639bp)
protein (213aa)
peroxiredoxin; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15] Tax=AR9
prx-1; peroxiredoxin (EC:1.11.1.15)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036CB8B2
rifcsphigho2_01_scaffold_4908_10
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9617..10057)
-----------------
DNA (441bp)
protein (147aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374F05D
Fur family ferric uptake regulator; K03711 Fur family transcriptional regulator, ferric uptake regulator Tax=CG_Desulfob_01
Fur family ferric uptake regulator
rifcsphigho2_01_scaffold_4908_11
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

10435..11385
-----------------
DNA (951bp)
protein (317aa)
glycerol 3-phosphate dehydrogenase (EC:1.1.1.94); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=AR9
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Fusobacterium gonidiaformans 3-1-5R RepID=E5BDL4_9FUSO
gpsA; glycerol-3-phosphate dehydrogenase
rifcsphigho2_01_scaffold_4908_12

Not on your lists

comp(11409..12050)
-----------------
DNA (642bp)
protein (214aa)
UPI000038E2D0 related cluster id=5800598 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61929.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
rifcsphigho2_01_scaffold_4908_13

Not on your lists

comp(12203..12550)
-----------------
DNA (348bp)
protein (116aa)
Glutaredoxin-like protein, YruB-family n=3 Tax=Jonquetella RepID=H0ULU1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KHO49062.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
Glutaredoxin-like protein, YruB-family
rifcsphigho2_01_scaffold_4908_14
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

12654..13013
-----------------
DNA (360bp)
protein (120aa)
Tax=AR9
rifcsphigho2_01_scaffold_4908_15
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

13069..14217
-----------------
DNA (1149bp)
protein (383aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000349FF69
Beta-N-acetylhexosaminidase Tax=AR9
hydrolase
rifcsphigho2_01_scaffold_4908_16
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

14311..15078
-----------------
DNA (768bp)
protein (256aa)
Tax=AR9
rifcsphigho2_01_scaffold_4908_17

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15354..16094
-----------------
DNA (741bp)
protein (247aa)
Small subunit ribosomal protein S3Ae {ECO:0000313|EMBL:KHO49067.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
Ribosomal protein S3AE id=5799806 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ribosomal protein S3AE
rifcsphigho2_01_scaffold_4908_18

Not on your lists

16157..16738
-----------------
DNA (582bp)
protein (194aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO49068.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
Ser/Thr protein phosphatase family protein id=5799785 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Metallophosphoesterase
rifcsphigho2_01_scaffold_4908_19
unknown

Not on your lists

16839..17762
-----------------
DNA (924bp)
protein (308aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4908_20

Not on your lists

comp(17794..18771)
-----------------
DNA (978bp)
protein (326aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
Probable tRNA pseudouridine synthase B n=13 Tax=Thermococcaceae RepID=TRUB_PYRFU id=5103295 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
putative tRNA pseudouridine synthase B
rifcsphigho2_01_scaffold_4908_21
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18888..19247)
-----------------
DNA (360bp)
protein (120aa)
50S ribosomal protein L31e; K02910 large subunit ribosomal protein L31e Tax=AR9
RPL31A; 50S ribosomal protein L31; K02910 large subunit ribosomal protein L31e id=5049181 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribosomal protein L31e
rifcsphigho2_01_scaffold_4908_22
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(19317..19490)
-----------------
DNA (174bp)
protein (58aa)
hypothetical protein
id=5800694 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
rifcsphigho2_01_scaffold_4908_23
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(19505..19954)
-----------------
DNA (450bp)
protein (150aa)
30S ribosomal protein S19e; K02966 small subunit ribosomal protein S19e Tax=AR9
30S ribosomal protein S19
30S ribosomal protein S19; K02966 small subunit ribosomal protein S19e id=5049179 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_01_scaffold_4908_24
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

20178..20672
-----------------
DNA (495bp)
protein (165aa)
Tax=AR9
rifcsphigho2_01_scaffold_4908_25
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

20756..21553
-----------------
DNA (798bp)
protein (266aa)
Tax=AR9
rifcsphigho2_01_scaffold_4908_26
GWA2_OD1_39_41, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

21724..22986
-----------------
DNA (1263bp)
protein (421aa)
Putative uncharacterized protein Tax=GWA2_OD1_39_41
hypothetical protein id=130132 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
rifcsphigho2_01_scaffold_4908_27
RBG_13_OD1_Falkowbacteria_36_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

23103..24320
-----------------
DNA (1218bp)
protein (406aa)
glutamate dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=RBG_13_OD1_Falkowbacteria_36_9_curated
glutamate dehydrogenase (EC:1.4.1.3)
Glutamate dehydrogenase id=5799766 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_4908_28
unknown

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24508..25257
-----------------
DNA (750bp)
protein (250aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4908_29
R_NC10_66_22, NC10, Bacteria

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25336..25557
-----------------
DNA (222bp)
protein (74aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
rifcsphigho2_01_scaffold_4908_30
unknown

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25557..26000
-----------------
DNA (444bp)
protein (148aa)

This feature has no annotations

Displaying items 1-30 of 34 in total

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