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rifcsphigho2_01_scaffold_1118

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_1118_1
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1278)
-----------------
DNA (1278bp)
protein (426aa)
Polysaccharide deacetylase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PRS6_CLOSD
Polysaccharide deacetylase precursor
Polysaccharide deacetylase {ECO:0000313|EMBL:CBH21580.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklan
rifcsphigho2_01_scaffold_1118_2
unknown

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1800..2312
-----------------
DNA (513bp)
protein (171aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1118_3
unknown

Not on your lists

2412..2768
-----------------
DNA (357bp)
protein (119aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1118_4
unknown

Not on your lists

2907..3386
-----------------
DNA (480bp)
protein (160aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1118_5
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3410..4537
-----------------
DNA (1128bp)
protein (376aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium EnGen0007 RepID=L2L2Z7_ENTFC
Glycosyltransferase {ECO:0000313|EMBL:EEU92550.1}; TaxID=565641 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis X98.;"
Glycosyltransferase, probably involved in cell wall biogenesis
rifcsphigho2_01_scaffold_1118_6
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

4606..5223
-----------------
DNA (618bp)
protein (206aa)
Tax=AR9
rifcsphigho2_01_scaffold_1118_7
unknown

Not on your lists

5361..5945
-----------------
DNA (585bp)
protein (195aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1118_8
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5992..6588)
-----------------
DNA (597bp)
protein (199aa)
Tax=AR17
rifcsphigho2_01_scaffold_1118_9
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6639..7235)
-----------------
DNA (597bp)
protein (199aa)
Tax=AR17
rifcsphigho2_01_scaffold_1118_10
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7286..7735)
-----------------
DNA (450bp)
protein (150aa)
Tax=AR17
rifcsphigho2_01_scaffold_1118_11
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

7880..11095
-----------------
DNA (3216bp)
protein (1072aa)
isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=AR9
Isoleucine--tRNA ligase id=5800603 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
isoleucyl-tRNA synthetase
rifcsphigho2_01_scaffold_1118_12
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(11102..11662)
-----------------
DNA (561bp)
protein (187aa)
Metal-dependent phosphohydrolase, HD protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BBX3_9BACT
putative HD superfamily hydrolase Tax=CG_Woesearch_02
putative hydrolases of HD superfamily
rifcsphigho2_01_scaffold_1118_13
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(11720..12235)
-----------------
DNA (516bp)
protein (172aa)
HEPN domain protein n=1 Tax=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) RepID=A6USV8_METVS
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
HEPN domain-containing protein
rifcsphigho2_01_scaffold_1118_14
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(12228..12821)
-----------------
DNA (594bp)
protein (198aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036745B5
DNA polymerase beta domain-containing protein region Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_1118_15
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(12918..15827)
-----------------
DNA (2910bp)
protein (970aa)
TVG1552703 protein n=2 Tax=root RepID=Q978B6_THEVO
Type III restriction-modification enzyme, helicase subunit Tax=CG_Micra_05
Type III restriction-modification enzyme, helicase subunit
rifcsphigho2_01_scaffold_1118_16
unknown

Not on your lists

comp(15829..16416)
-----------------
DNA (588bp)
protein (196aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1118_17

Not on your lists

comp(16416..18449)
-----------------
DNA (2034bp)
protein (678aa)
DNA adenine modification methylase n=2 Tax=Thermoplasma volcanium RepID=Q978B5_THEVO
DNA methyltransferase {ECO:0000313|EMBL:AKA48124.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
adenine-specific DNA methylase
rifcsphigho2_01_scaffold_1118_18
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

18506..18772
-----------------
DNA (267bp)
protein (89aa)
"Winged helix" DNA-binding domain Tax=AR19
rifcsphigho2_01_scaffold_1118_19
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

18898..19866
-----------------
DNA (969bp)
protein (323aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E023F
Tax=AR4
rifcsphigho2_01_scaffold_1118_20
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

19856..20176
-----------------
DNA (321bp)
protein (107aa)
id=5041876 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
rifcsphigho2_01_scaffold_1118_21

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comp(20202..21938)
-----------------
DNA (1737bp)
protein (579aa)
pepF/M3 family oligoendopeptidase; K08602 oligoendopeptidase F [EC:3.4.24.-] id=5047382 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Oligoendopeptidase F {ECO:0000313|EMBL:KHO54160.1}; EC=3.4.24.- {ECO:0000313|EMBL:KHO54160.1};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
putative oligoendopeptidase F (EC:3.4.24.-)
rifcsphigho2_01_scaffold_1118_22
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

22203..22709
-----------------
DNA (507bp)
protein (169aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036DF465
hypothetical protein Tax=RBG_16_Micrarchaeota_36_9_curated
MarR family regulator
rifcsphigho2_01_scaffold_1118_23
unknown

Not on your lists

comp(22765..23025)
-----------------
DNA (261bp)
protein (87aa)

This feature has no annotations

rifcsphigho2_01_scaffold_1118_24
BJP_08E140C01_Falkowbacteria_33_19, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

23193..24650
-----------------
DNA (1458bp)
protein (486aa)
hmo:HM1_0977 purA; adenylosuccinate synthetase; K01939 adenylosuccinate synthase [EC:6.3.4.4] id=8143 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
adenylosuccinate synthetase (EC:6.3.4.4)
Tax=BJP_08E140C01_Falkowbacteria_33_19
rifcsphigho2_01_scaffold_1118_25
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24689..26371)
-----------------
DNA (1683bp)
protein (561aa)
putative N-acetylmuramoyl-L-alanine amidase AmpD (EC:3.5.1.28) id=5042265 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
putative N-acetylmuramoyl-L-alanine amidase AmpD (EC:3.5.1.28)
Tax=BJP_IG2069_Desfulfarculales_53_13
rifcsphigho2_01_scaffold_1118_26
RIFOXYC1_FULL_OD1_Moranbacteria_44_13_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

26585..26860
-----------------
DNA (276bp)
protein (92aa)
electron transporter RnfE n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237CA65
hypothetical protein; K08982 putative membrane protein Tax=RIFOXYC1_FULL_OD1_Moranbacteria_44_13_curated
rifcsphigho2_01_scaffold_1118_27

Not on your lists

26894..27748
-----------------
DNA (855bp)
protein (285aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50907.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
DSBA oxidoreductase
DSBA oxidoreductase id=5241602 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_1118_28
RIFOXYB1_FULL_OP11_Amesbacteria_44_23_curated, Amesbacteria, Microgenomates, Bacteria

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27836..28036
-----------------
DNA (201bp)
protein (67aa)
Uncharacterized protein Tax=RIFOXYB1_FULL_OP11_Amesbacteria_44_23_curated
rifcsphigho2_01_scaffold_1118_29

Not on your lists

28121..29602
-----------------
DNA (1482bp)
protein (494aa)
heavy metal transporter n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B4EB21
Putative transport protein {ECO:0000313|EMBL:KHO50702.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
heavy metal transport/detoxification protein
rifcsphigho2_01_scaffold_1118_30
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

29636..30091
-----------------
DNA (456bp)
protein (152aa)
heavy metal transport/detoxification protein Tax=CG_Pacearch_05
hypothetical protein id=5041918 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Displaying items 1-30 of 50 in total

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