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rifcsphigho2_01_scaffold_19642

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_19642_1
Candidatus Omnitrophus sp. SKK-01, Candidatus Omnitrophus, Omnitrophica, Bacteria

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104..2404
-----------------
DNA (2301bp)
protein (767aa)
Type I site-specific restriction-modification system, R (Restriction) subunit {ECO:0000313|EMBL:KJJ83527.1}; TaxID=1609969 species="Bacteria; Omnitrophica; Candidatus Omnitrophus.;" source="Candidatus
EcoEI R domain protein id=3626639 bin=GWC2_Clostridiales_40_7 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=GWC2_Clostridiales_40_7 organism_group=Firmicute rbh
Type I site-specific deoxyribonuclease
rifcsphigho2_01_scaffold_19642_2
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2507..3205)
-----------------
DNA (699bp)
protein (233aa)
Exonuclease III n=1 Tax=Flavobacterium sp. CF136 RepID=J2IY03_9FLAO
Strain DSM 12611 Contig15, whole genome shotgun sequence {ECO:0000313|EMBL:KIO51406.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacteriu
hypothetical protein
rifcsphigho2_01_scaffold_19642_3
unknown

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3219..3395
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

rifcsphigho2_01_scaffold_19642_4
unknown

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comp(3370..3627)
-----------------
DNA (258bp)
protein (86aa)

This feature has no annotations

rifcsphigho2_01_scaffold_19642_5
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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3711..4739
-----------------
DNA (1029bp)
protein (343aa)
hypothetical protein Tax=CG_Solirubrobact_01
Uncharacterized protein id=4071910 bin=GWF2_Lentisphaerae_50_93 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
hypothetical protein
rifcsphigho2_01_scaffold_19642_6
Methanococcus maripaludis, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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4788..7646
-----------------
DNA (2859bp)
protein (953aa)
UvrABC system protein A n=1 Tax=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) RepID=A6VK30_METM7
excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=426368 species="Ar
rifcsphigho2_01_scaffold_19642_7
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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7746..9323
-----------------
DNA (1578bp)
protein (526aa)
UvrABC system protein C n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CV51_METMJ
uvrC; excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=368407 species="Ar
rifcsphigho2_01_scaffold_19642_8
unknown

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9697..10137
-----------------
DNA (441bp)
protein (147aa)

This feature has no annotations

rifcsphigho2_01_scaffold_19642_9
RLO_WOR_2_51_24, WOR-2, Bacteria

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10431..11633
-----------------
DNA (1203bp)
protein (401aa)
bifunctional phosphoglycerate kinase/triosephosphate isomerase (EC:2.7.2.3 5.3.1.1)
Phosphoglycerate kinase n=1 Tax=Clostridium sp. CAG:470 RepID=R7FH63_9CLOT
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
rifcsphigho2_01_scaffold_19642_10
unknown

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comp(11671..12579)
-----------------
DNA (909bp)
protein (303aa)

This feature has no annotations

rifcsphigho2_01_scaffold_19642_11
unknown

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comp(12735..13991)
-----------------
DNA (1257bp)
protein (419aa)

This feature has no annotations

rifcsphigho2_01_scaffold_19642_12
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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14147..15580
-----------------
DNA (1434bp)
protein (478aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036398B8
RHS repeat-associated core domain-containing protein Tax=GWA2_WOR_2_47_8_curated
rifcsphigho2_01_scaffold_19642_13
unknown

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15582..19028
-----------------
DNA (3447bp)
protein (1149aa)

This feature has no annotations

Displaying 13 items

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