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rifcsphigho2_01_scaffold_9365

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_9365_1
AR9, Woesearchaeaota, DPANN, Archaea

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comp(45..308)
-----------------
DNA (264bp)
protein (88aa)
hypothetical protein Tax=AR9
hypothetical protein id=5046354 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
PRC-barrel protein
rifcsphigho2_01_scaffold_9365_2
unknown

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comp(546..1466)
-----------------
DNA (921bp)
protein (307aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9365_3
R_OP3X_45_10, OP3X, Bacteria

Not on your lists

comp(1474..2493)
-----------------
DNA (1020bp)
protein (340aa)
Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
rifcsphigho2_01_scaffold_9365_4

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2626..3462
-----------------
DNA (837bp)
protein (279aa)
Phosphatidylglycerol:prolipoprotein diacylglycerol transferase {ECO:0000313|EMBL:KHO50256.1}; EC=2.-.-.- {ECO:0000313|EMBL:KHO50256.1};; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;
Prolipoprotein diacylglyceryl transferase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I0P8_9BACT id=5103549 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Prolipoprotein diacylglyceryl transferase
rifcsphigho2_01_scaffold_9365_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3632..4072
-----------------
DNA (441bp)
protein (147aa)
Blue copper domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHG3_NITGG
plastocyanin
Blue copper domain-containing protein {ECO:0000313|EMBL:AFU57237.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="N
rifcsphigho2_01_scaffold_9365_6
unknown

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4149..4478
-----------------
DNA (330bp)
protein (110aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9365_7
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(4540..4683)
-----------------
DNA (144bp)
protein (48aa)
Tax=CG_Woesearch_03
rifcsphigho2_01_scaffold_9365_8
unknown

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comp(4857..5555)
-----------------
DNA (699bp)
protein (233aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9365_9
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(5636..7402)
-----------------
DNA (1767bp)
protein (589aa)
RNase L inhibitor; K06174 ATP-binding cassette, sub-family E, member 1 Tax=RBG_13_Woesearchaeota_36_6_curated
RNase L inhibitor; K06174 ATP-binding cassette, sub-family E, member 1 id=5047426 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ATPase RIL
rifcsphigho2_01_scaffold_9365_10
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

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7611..7850
-----------------
DNA (240bp)
protein (80aa)
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
rifcsphigho2_01_scaffold_9365_11

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comp(7961..10324)
-----------------
DNA (2364bp)
protein (788aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000372F63A
hypothetical protein
Marine sediment metagenome DNA, contig: S06H3_L00143 {ECO:0000313|EMBL:GAI04689.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsphigho2_01_scaffold_9365_12
AR18, Woesearchaeaota, DPANN, Archaea

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10378..10890
-----------------
DNA (513bp)
protein (171aa)
coiled-coil Tax=AR18
rifcsphigho2_01_scaffold_9365_13

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10987..11214
-----------------
DNA (228bp)
protein (76aa)
id=5046266 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46067.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_01_scaffold_9365_14

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11279..11752
-----------------
DNA (474bp)
protein (158aa)
Marine sediment metagenome DNA, contig: S01H1_S08208 {ECO:0000313|EMBL:GAG06249.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_01_scaffold_9365_15

Not on your lists


comp(12105..13754)
-----------------
DNA (1650bp)
protein (550aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00284};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284};
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374A334
Phenylalanine-tRNA ligase beta subunit
rifcsphigho2_01_scaffold_9365_16

Not on your lists


comp(13857..15416)
-----------------
DNA (1560bp)
protein (520aa)
Phenylalanyl-tRNA synthetase alpha chain {ECO:0000313|EMBL:KHO49052.1}; EC=6.1.1.20 {ECO:0000313|EMBL:KHO49052.1};; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037CA4E5
Phenylalanine-tRNA ligase alpha subunit
rifcsphigho2_01_scaffold_9365_17

Not on your lists

comp(15602..16399)
-----------------
DNA (798bp)
protein (266aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO49053.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
hypothetical protein id=5041796 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_01_scaffold_9365_18
AR9, Woesearchaeaota, DPANN, Archaea

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comp(16644..17726)
-----------------
DNA (1083bp)
protein (361aa)
Cell division like protein pelota; K06965 protein pelota Tax=AR9
Protein pelota homolog id=5800182 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
mRNA surveillance protein Pelota
rifcsphigho2_01_scaffold_9365_19
Bacillus sp. 2_A_57_CT2, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(17883..18791)
-----------------
DNA (909bp)
protein (303aa)
Putative uncharacterized protein n=1 Tax=Bacillus sp. 2_A_57_CT2 RepID=E5WN55_9BACI
Uncharacterized protein {ECO:0000313|EMBL:EFV75941.1}; TaxID=665959 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. 2_A_57_CT2.;"
panK; pantothenate kinase
rifcsphigho2_01_scaffold_9365_20

Not on your lists

comp(19003..19329)
-----------------
DNA (327bp)
protein (109aa)
Putative endo alpha-1,4 polygalactosaminidase n=1 Tax=uncultured bacterium RepID=Q20JY3_9BACT id=73651 bin=ACD51 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
Uncharacterized protein {ECO:0000313|EMBL:EKD63648.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
rifcsphigho2_01_scaffold_9365_21
RBG_16_Chloroflexi_58_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(19310..19948)
-----------------
DNA (639bp)
protein (213aa)
TM1410 hypothetical-related protein n=1 Tax=Denitrovibrio acetiphilus (strain DSM 12809 / N2460) RepID=D4H7N2_DENA2
hypothetical protein Tax=RBG_16_Chloroflexi_58_14_curated
hypothetical protein
rifcsphigho2_01_scaffold_9365_22
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(20127..21335)
-----------------
DNA (1209bp)
protein (403aa)
replication factor C large subunit; K04800 replication factor C large subunit Tax=AR9
replication factor C large subunit; K04800 replication factor C large subunit id=5048465 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Replication factor C large subunit
rifcsphigho2_01_scaffold_9365_23
R_OD1_Kaiserbacteria_54_24, Kaiserbacteria, Parcubacteria, Bacteria

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comp(21421..21849)
-----------------
DNA (429bp)
protein (143aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_54_24_curated
rifcsphigho2_01_scaffold_9365_24

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21992..23410
-----------------
DNA (1419bp)
protein (473aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ19_NITGG
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:00
rifcsphigho2_01_scaffold_9365_25
unknown

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comp(23455..23760)
-----------------
DNA (306bp)
protein (102aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9365_26

Not on your lists

comp(23871..24773)
-----------------
DNA (903bp)
protein (301aa)
highly conserved protein containing a thioredoxin domain; K06888 id=5048300 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54018.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
rifcsphigho2_01_scaffold_9365_27
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(24746..25576)
-----------------
DNA (831bp)
protein (277aa)
highly conserved protein containing a thioredoxin domain; K06888 id=5048300 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
highly conserved protein containing a thioredoxin domain; K06888 Tax=AR18
thioredoxin domain protein
rifcsphigho2_01_scaffold_9365_28

Not on your lists

25750..26880
-----------------
DNA (1131bp)
protein (377aa)
putative RNA methyltransferase CTC_01941 (EC:2.1.1.-)
RNA methyltransferase id=5047407 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
RNA methyltransferase {ECO:0000313|EMBL:KHO54185.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsphigho2_01_scaffold_9365_29
R_OP11_Woesebacteria_39_25, Woesebacteria, Microgenomates, Bacteria

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27298..28158
-----------------
DNA (861bp)
protein (287aa)
tktB; transketolase N-terminal domain protein (EC:2.2.1.1) Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_25_curated
Transketolase domain protein id=4790066 bin=GWC2_OD1_43_27 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Transketolase protein
rifcsphigho2_01_scaffold_9365_30
RIFOXYB1_FULL_OP11_Woesebacteria_47_31_curated, Woesebacteria, Microgenomates, Bacteria

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28155..29150
-----------------
DNA (996bp)
protein (332aa)
transketolase; K00615 transketolase [EC:2.2.1.1] Tax=RIFOXYB1_FULL_OP11_Woesebacteria_47_31_curated
Transketolase central region id=3423631 bin=GWA1_ZB2_49_26 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Transketolase, central region
Displaying 30 items

View Taxonomy