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rifcsphigho2_01_scaffold_9483

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_9483_1

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comp(150..899)
-----------------
DNA (750bp)
protein (250aa)
RIO kinase 1 {ECO:0000313|EMBL:KHO50185.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KHO50185.1};; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
Serine/threonine protein kinase involved in cell cycle control id=5800010 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Non-specific serine/threonine protein kinase
rifcsphigho2_01_scaffold_9483_2
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1012..1428
-----------------
DNA (417bp)
protein (139aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KUM0_METHD
methionine-R-sulfoxide reductase
rifcsphigho2_01_scaffold_9483_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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1494..2840
-----------------
DNA (1347bp)
protein (449aa)
TrkH family potassium uptake protein (EC:3.6.3.14)
Potassium uptake protein, TrkH family n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RXT2_THEOJ
TrkH family potassium uptake protein; K03498 trk system potassium uptake protein TrkH Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_9483_4
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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2929..3633
-----------------
DNA (705bp)
protein (235aa)
TrkA-N domain protein n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8DYW7_DICTD
ktrA; Ktr system potassium uptake protein KtrA; K03499 trk system potassium uptake protein TrkA Tax=RBG_13_Pacearchaeota_36_9_curated
TrkA-N domain-containing protein
rifcsphigho2_01_scaffold_9483_5
unknown

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comp(3637..6048)
-----------------
DNA (2412bp)
protein (804aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9483_6
unknown

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6348..6650
-----------------
DNA (303bp)
protein (101aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9483_7
AR18, Woesearchaeaota, DPANN, Archaea

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comp(6709..8094)
-----------------
DNA (1386bp)
protein (462aa)
Putative peptidase family M23/M37 id=5048834 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Putative peptidase family M23/M37 Tax=AR18
rifcsphigho2_01_scaffold_9483_8

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8729..10138
-----------------
DNA (1410bp)
protein (470aa)
DNA primase DnaG {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020821}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020820};; TaxID=1579369 species="Archaea.;" sourc
DNA primase id=5048471 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_01_scaffold_9483_9
AR9, Woesearchaeaota, DPANN, Archaea

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comp(10278..11483)
-----------------
DNA (1206bp)
protein (402aa)
id=5046362 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR9
rifcsphigho2_01_scaffold_9483_10
AR9, Woesearchaeaota, DPANN, Archaea

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11707..13257
-----------------
DNA (1551bp)
protein (517aa)
glycyl-tRNA synthetase (EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=AR9
Putative tRNA synthetase class II core domain (G, H, P, S and T) id=4930112 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
rifcsphigho2_01_scaffold_9483_11
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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13269..13844
-----------------
DNA (576bp)
protein (192aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003780A24
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein
rifcsphigho2_01_scaffold_9483_12
CG_Woesearch_03, Woesearchaeota, Archaea

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13831..14010
-----------------
DNA (180bp)
protein (60aa)
hypothetical protein Tax=CG_Woesearch_03
rifcsphigho2_01_scaffold_9483_13

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14056..14466
-----------------
DNA (411bp)
protein (137aa)
Polymerase beta domain protein region protein {ECO:0000313|EMBL:KKU29877.1}; TaxID=1618654 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_46_20.;"
Displaying 13 items

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