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rifcsphigho2_01_scaffold_18917

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_18917_1
Pseudoalteromonas lipolytica, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(82..753)
-----------------
DNA (672bp)
protein (224aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Idiomarina sp. A28L RepID=F7RYI3_9GAMM
ABC transporter {ECO:0000313|EMBL:EWH06422.1}; TaxID=1452721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalterom
ABC transporter, ATP-binding protein
rifcsphigho2_01_scaffold_18917_2

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comp(795..2090)
-----------------
DNA (1296bp)
protein (432aa)
Asparaginyl-tRNA synthetase {ECO:0000313|EMBL:KHO54803.1}; EC=6.1.1.22 {ECO:0000313|EMBL:KHO54803.1};; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
Asparaginyl-tRNA synthetase n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IGF4_ACIB4 id=5103855 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Asparaginyl-tRNA synthetase
rifcsphigho2_01_scaffold_18917_3
unknown

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2260..2811
-----------------
DNA (552bp)
protein (184aa)

This feature has no annotations

rifcsphigho2_01_scaffold_18917_4
CG_Woesearch_02, Woesearchaeota, Archaea

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2940..3233
-----------------
DNA (294bp)
protein (98aa)
50S ribosomal protein L21; K02889 large subunit ribosomal protein L21e Tax=CG_Woesearch_02
LSU ribosomal protein L21E id=5799708 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L21e
rifcsphigho2_01_scaffold_18917_5
R_OD1_Yanofskybacteria_39_8b, Yanofskybacteria, Parcubacteria, Bacteria

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3272..3652
-----------------
DNA (381bp)
protein (127aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_39_8b_curated
rifcsphigho2_01_scaffold_18917_6

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3757..4344
-----------------
DNA (588bp)
protein (196aa)
hypothetical protein; K07572 putative nucleotide binding protein id=5051518 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53107.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
DNA-binding protein
rifcsphigho2_01_scaffold_18917_7
unknown

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comp(4384..4794)
-----------------
DNA (411bp)
protein (137aa)

This feature has no annotations

rifcsphigho2_01_scaffold_18917_8
ACD3, Gracilibacteria, Bacteria

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4925..5338
-----------------
DNA (414bp)
protein (138aa)
HIT-like 8..136 Tax=ACD3
HIT-like 8..136 id=49474 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
rifcsphigho2_01_scaffold_18917_9
unknown

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comp(5383..5778)
-----------------
DNA (396bp)
protein (132aa)

This feature has no annotations

rifcsphigho2_01_scaffold_18917_10
unknown

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5972..6520
-----------------
DNA (549bp)
protein (183aa)

This feature has no annotations

rifcsphigho2_01_scaffold_18917_11
unknown

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6544..7104
-----------------
DNA (561bp)
protein (187aa)

This feature has no annotations

rifcsphigho2_01_scaffold_18917_12
CG_Woesearch_03, Woesearchaeota, Archaea

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7109..7684
-----------------
DNA (576bp)
protein (192aa)
id=5046578 Tax=CG_Woesearch_03
rifcsphigho2_01_scaffold_18917_13
CG_Pacearch_06, Pacearchaeota, Archaea

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7783..8094
-----------------
DNA (312bp)
protein (104aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000371FDBC
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein
rifcsphigho2_01_scaffold_18917_14
CG_Pacearch_06, Pacearchaeota, Archaea

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8100..8447
-----------------
DNA (348bp)
protein (116aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369F569
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein
rifcsphigho2_01_scaffold_18917_15
Methanocaldococcus fervens, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(8478..9131)
-----------------
DNA (654bp)
protein (218aa)
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
Triosephosphate isomerase n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P5F5_METFA
rifcsphigho2_01_scaffold_18917_16
unknown

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comp(9181..9417)
-----------------
DNA (237bp)
protein (79aa)

This feature has no annotations

Displaying 16 items

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