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rifcsphigho2_01_scaffold_3011

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_3011_1
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(155..754)
-----------------
DNA (600bp)
protein (200aa)
id=5041691 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
rifcsphigho2_01_scaffold_3011_2
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(783..1295)
-----------------
DNA (513bp)
protein (171aa)
id=5041691 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
rifcsphigho2_01_scaffold_3011_3
unknown

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comp(1383..1619)
-----------------
DNA (237bp)
protein (79aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3011_4
unknown

Not on your lists

comp(1852..2268)
-----------------
DNA (417bp)
protein (139aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3011_5
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2543..3655
-----------------
DNA (1113bp)
protein (371aa)
cytochrome c biogenesis protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
cytochrome c biogenesis protein transmembrane region id=86387 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
rifcsphigho2_01_scaffold_3011_6

Not on your lists

3720..4250
-----------------
DNA (531bp)
protein (177aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51714.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
hypothetical protein id=5043713 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_01_scaffold_3011_7

Not on your lists

4261..4701
-----------------
DNA (441bp)
protein (147aa)
coiled-coil id=5043714 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO47030.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsphigho2_01_scaffold_3011_8
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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4762..5415
-----------------
DNA (654bp)
protein (218aa)
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Endonuclease III n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S0V9_FERPA
rifcsphigho2_01_scaffold_3011_9
unknown

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comp(5483..6205)
-----------------
DNA (723bp)
protein (241aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3011_10
GWA1_OP11_41_11_plus, Curtissbacteria, Microgenomates, Bacteria

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comp(6393..6680)
-----------------
DNA (288bp)
protein (96aa)
Uncharacterized protein Tax=GWA1_OP11_41_11_plus
rifcsphigho2_01_scaffold_3011_11
unknown

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comp(6733..7305)
-----------------
DNA (573bp)
protein (191aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3011_12

Not on your lists


7476..8075
-----------------
DNA (600bp)
protein (200aa)
DNA-directed RNA polymerase subunit E' (EC:2.7.7.6); K03049 DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] id=5049216 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:KHO45207.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KHO45207.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
DNA-directed RNA polymerase subunit E
rifcsphigho2_01_scaffold_3011_13

Not on your lists

8152..8340
-----------------
DNA (189bp)
protein (63aa)
rpoE2; DNA-directed RNA polymerase subunit E'; K03050 DNA-directed RNA polymerase subunit E" [EC:2.7.7.6] id=5049217 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:KHO45208.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KHO45208.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
DNA-directed RNA polymerase subunit E
rifcsphigho2_01_scaffold_3011_14

Not on your lists

8407..8709
-----------------
DNA (303bp)
protein (101aa)
rps24e; 30S ribosomal protein S24E; K02974 small subunit ribosomal protein S24e id=5047529 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_01_scaffold_3011_15

Not on your lists

8740..8958
-----------------
DNA (219bp)
protein (73aa)
30S ribosomal protein S27; K02977 small subunit ribosomal protein S27Ae id=5049219 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S27ae {ECO:0000256|HAMAP-Rule:MF_00777}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
30S ribosomal protein S27ae
rifcsphigho2_01_scaffold_3011_16
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

9108..9788
-----------------
DNA (681bp)
protein (227aa)
phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
DNA polymerase n=1 Tax=Patulibacter americanus RepID=UPI0003B595CC
DNA polymerase
rifcsphigho2_01_scaffold_3011_17

Not on your lists

9888..10865
-----------------
DNA (978bp)
protein (326aa)
Magnesium and cobalt transport protein CorA n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B712_METTP
Marine sediment metagenome DNA, contig: S01H1_S18866 {ECO:0000313|EMBL:GAG27401.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
magnesium and cobalt transport protein CorA
rifcsphigho2_01_scaffold_3011_18
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists


10922..12733
-----------------
DNA (1812bp)
protein (604aa)
alaS; alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=CG_Pacearch_03
Alanine--tRNA ligase n=1 Tax=uncultured bacterium RepID=K1Z4Z2_9BACT
alanine--tRNA ligase
rifcsphigho2_01_scaffold_3011_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(12748..13407)
-----------------
DNA (660bp)
protein (220aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037F2744
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein
rifcsphigho2_01_scaffold_3011_20
Thermoplasmatales archaeon SCGC AB-540-F20, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(13487..14341)
-----------------
DNA (855bp)
protein (285aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TFG3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMR75292.1}; TaxID=1242866 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-540-F20.;"
hypothetical protein
rifcsphigho2_01_scaffold_3011_21
unknown

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14626..15390
-----------------
DNA (765bp)
protein (255aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3011_22
unknown

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15416..16162
-----------------
DNA (747bp)
protein (249aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3011_23
unknown

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16159..18045
-----------------
DNA (1887bp)
protein (629aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3011_24
unknown

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18048..20342
-----------------
DNA (2295bp)
protein (765aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3011_25
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(20389..20877)
-----------------
DNA (489bp)
protein (163aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E38A1
hypothetical protein Tax=CG_Pacearch_02
hypothetical protein
rifcsphigho2_01_scaffold_3011_26
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(20852..21418)
-----------------
DNA (567bp)
protein (189aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E3B31
hypothetical protein Tax=CG_Pacearch_02
hypothetical protein
rifcsphigho2_01_scaffold_3011_27
unknown

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comp(21470..22444)
-----------------
DNA (975bp)
protein (325aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3011_28

Not on your lists

22675..23262
-----------------
DNA (588bp)
protein (196aa)
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Leptospira licerasiae RepID=I0XNM9_9LEPT
Uncharacterized protein {ECO:0000313|EMBL:KKO02832.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rifcsphigho2_01_scaffold_3011_29

Not on your lists

23313..23969
-----------------
DNA (657bp)
protein (219aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO45306.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein id=5048643 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
lipoprotein B
rifcsphigho2_01_scaffold_3011_30
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

24055..24483
-----------------
DNA (429bp)
protein (143aa)
hypothetical protein n=1 Tax=cyanobacterium PCC 7702 RepID=UPI000374366D
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
hypothetical protein
Displaying items 1-30 of 36 in total

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