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rifcsphigho2_01_scaffold_5198

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_5198_1
unknown

Not on your lists

3..212
-----------------
DNA (210bp)
protein (70aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5198_2

Not on your lists

215..490
-----------------
DNA (276bp)
protein (92aa)
prophage antirepressor id=5043709 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Prophage antirepressor {ECO:0000313|EMBL:KHO47025.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
prophage antirepressor
rifcsphigho2_01_scaffold_5198_3
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(558..785)
-----------------
DNA (228bp)
protein (76aa)
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVT8_9BACT id=5103600 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein; K07339 hypothetical protein Tax=CG_Woesearch_01
hypothetical protein
rifcsphigho2_01_scaffold_5198_4

Not on your lists

comp(790..1002)
-----------------
DNA (213bp)
protein (71aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI000370786B
Marine sediment metagenome DNA, contig: S12H4_L00628 {ECO:0000313|EMBL:GAI78303.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
rifcsphigho2_01_scaffold_5198_5

Not on your lists

1187..2005
-----------------
DNA (819bp)
protein (273aa)
Marine sediment metagenome DNA, contig: S01H1_L03075 {ECO:0000313|EMBL:GAF84563.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_01_scaffold_5198_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

2193..2477
-----------------
DNA (285bp)
protein (95aa)
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein id=5042183 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein
rifcsphigho2_01_scaffold_5198_7
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

2468..2806
-----------------
DNA (339bp)
protein (113aa)
hypothetical protein Tax=RBG_16_Micrarchaeota_49_10_curated
hypothetical protein id=5042184 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein
rifcsphigho2_01_scaffold_5198_8
BJP_IG2069_Methanobacteriales_33_27, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2840..4084)
-----------------
DNA (1245bp)
protein (415aa)
Putative membrane protein n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6T1U8_9EURY
MgtC family protein
Tax=BJP_IG2069_Methanobacteriales_33_27
rifcsphigho2_01_scaffold_5198_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(4195..6735)
-----------------
DNA (2541bp)
protein (847aa)
DNA polymerase Pol2; K02319 DNA polymerase I [EC:2.7.7.7] Tax=CG_Woesearch_02
DNA polymerase n=3 Tax=Pyrococcus RepID=DPOL_PYRFU id=5103201 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA polymerase
rifcsphigho2_01_scaffold_5198_10

Not on your lists

comp(6900..7511)
-----------------
DNA (612bp)
protein (204aa)
Protein containing Nucleotidyltransferase domain n=1 Tax=sediment metagenome RepID=D9PJD4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KHO49201.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
rifcsphigho2_01_scaffold_5198_11
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7501..7899)
-----------------
DNA (399bp)
protein (133aa)
id=5049670 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsphigho2_01_scaffold_5198_12
unknown

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comp(8028..8636)
-----------------
DNA (609bp)
protein (203aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5198_13
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8686..9723)
-----------------
DNA (1038bp)
protein (346aa)
nucleolar protein I Tax=AR9
tRNA (Cytosine-48,49-C(5)-) methyltransferase id=5800672 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA methylase, NOL1/NOP2/sun family
rifcsphigho2_01_scaffold_5198_14
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


comp(9768..11135)
-----------------
DNA (1368bp)
protein (456aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
CCA-adding enzyme n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WSV3_9EURY
tRNA nucleotidyltransferase CCA-adding enzyme
rifcsphigho2_01_scaffold_5198_15
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(11258..11503)
-----------------
DNA (246bp)
protein (82aa)
Tax=AR18
rifcsphigho2_01_scaffold_5198_16
R_OP3X_45_10, OP3X, Bacteria

Not on your lists

11718..12701
-----------------
DNA (984bp)
protein (328aa)
Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
rifcsphigho2_01_scaffold_5198_17
R_OP3X_45_10, OP3X, Bacteria

Not on your lists

12704..13675
-----------------
DNA (972bp)
protein (324aa)
Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
rifcsphigho2_01_scaffold_5198_18
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(13886..15031)
-----------------
DNA (1146bp)
protein (382aa)
group 1 glycosyltransferase (EC:2.4.-.-)
glycosyl transferase group 1 Tax=RBG_13_Woesearchaeota_36_6_curated
Glycosyl transferase group 1 id=5799630 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_5198_19

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comp(15278..16138)
-----------------
DNA (861bp)
protein (287aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51094.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
UPI0002893CB3 related cluster id=5044041 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
LmbE family protein
rifcsphigho2_01_scaffold_5198_20

Not on your lists

comp(16532..17419)
-----------------
DNA (888bp)
protein (296aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50942.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
seg id=5043957 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_5198_21
unknown

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comp(17516..18580)
-----------------
DNA (1065bp)
protein (355aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5198_22
Parcubacteria bacterium GW2011_GWA1_33_6, Parcubacteria, Bacteria

Not on your lists

comp(18655..19656)
-----------------
DNA (1002bp)
protein (334aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein {ECO:0000313|EMBL:KKP55282.1}; TaxID=1618781 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_33_6.;"
Uncharacterized protein id=5800423 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hydroxyacid dehydrogenase
rifcsphigho2_01_scaffold_5198_23
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(19690..20199)
-----------------
DNA (510bp)
protein (170aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI00035C462D
hypothetical protein
HEPN domain-containing protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_5198_24
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(20244..20663)
-----------------
DNA (420bp)
protein (140aa)
hypothetical protein
DNA polymerase beta domain protein region Tax=RBG_13_Pacearchaeota_36_9_curated
DNA polymerase beta domain protein region id=3464821 bin=PER_GWC2_41_7 species=Methanoplanus limicola genus=Methanoplanus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_01_scaffold_5198_25
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(20935..21951)
-----------------
DNA (1017bp)
protein (339aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
rifcsphigho2_01_scaffold_5198_26
unknown

Not on your lists

comp(22289..22402)
-----------------
DNA (114bp)
protein (38aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5198_27
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(22571..23824)
-----------------
DNA (1254bp)
protein (418aa)
hypothetical protein Tax=CG_Woesearch_02
Uncharacterized protein id=5799713 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_01_scaffold_5198_28
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(23876..24889)
-----------------
DNA (1014bp)
protein (338aa)
hypothetical protein id=5045320 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein Tax=AR4
hypothetical protein
rifcsphigho2_01_scaffold_5198_29

Not on your lists

comp(24935..26197)
-----------------
DNA (1263bp)
protein (421aa)
DNA double-strand break repair protein Mre11 id=5799870 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA double-strand break repair protein Mre11 {ECO:0000313|EMBL:AJF61201.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Metallophosphoesterase
rifcsphigho2_01_scaffold_5198_30
unknown

Not on your lists

26347..27234
-----------------
DNA (888bp)
protein (296aa)

This feature has no annotations

Displaying items 1-30 of 33 in total

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