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rifcsphigho2_01_scaffold_716

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_716_1
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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210..1268
-----------------
DNA (1059bp)
protein (353aa)
Pyruvate carboxyltransferase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A1R9_NITMS rbh
pyruvate carboxyltransferase
Pyruvate carboxyltransferase {ECO:0000313|EMBL:ABX12040.1}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (stra
rifcsphigho2_01_scaffold_716_2
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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1290..2471
-----------------
DNA (1182bp)
protein (394aa)
aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase {ECO:0000313|EMBL:ACI21177.1}; EC=2.6.1.1 {ECO:0000313|EMBL:ACI21177.1};; TaxID=289376 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;"
Aspartate aminotransferase n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YIN0_THEYD
rifcsphigho2_01_scaffold_716_3
RIFOXYD1_FULL_OD1_48_21_curated, Parcubacteria, Bacteria

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2525..2884
-----------------
DNA (360bp)
protein (120aa)
acpS; holo-(acyl-carrier-protein) synthase (EC:2.7.8.7); K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=RIFOXYD1_FULL_OD1_48_21_curated
acpS; Holo-[acyl-carrier-protein] synthase (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase n=1 Tax=Clostridium sp. CAG:306 RepID=R6PBV2_9CLOT
rifcsphigho2_01_scaffold_716_4
unknown

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2959..3726
-----------------
DNA (768bp)
protein (256aa)

This feature has no annotations

rifcsphigho2_01_scaffold_716_5
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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3749..4417
-----------------
DNA (669bp)
protein (223aa)
Cyclase family protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A1S1_NITMS
cyclase family protein
Cyclase family protein {ECO:0000313|EMBL:ABX12042.1}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SCM
rifcsphigho2_01_scaffold_716_6

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4538..4816
-----------------
DNA (279bp)
protein (93aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZPP4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD46243.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rifcsphigho2_01_scaffold_716_7
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

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5052..6827
-----------------
DNA (1776bp)
protein (592aa)
hypothetical protein n=2 Tax=Bacteria RepID=UPI0003672B84
radical SAM protein Tax=GWD2_Bacteroidetes_33_33_curated
radical SAM protein
rifcsphigho2_01_scaffold_716_8
GWA2_OD1_52_12, Kaiserbacteria, Parcubacteria, Bacteria

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7013..8575
-----------------
DNA (1563bp)
protein (521aa)
putative o-succinylbenzoate--CoA ligase (EC:6.2.1.26)
Putative o-succinylbenzoate--CoA ligase n=1 Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0RAK2_9DELT
Aminotransferase {ECO:0000313|EMBL:KKW24557.1}; TaxID=1618671 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Kaiserbacteria) bacterium GW2011_GWA2_52_12.;"
rifcsphigho2_01_scaffold_716_9
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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8729..9973
-----------------
DNA (1245bp)
protein (415aa)
Uncharacterized protein {ECO:0000313|EMBL:KIF66079.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
type 12 methyltransferase id=4302081 bin=GWF2_Lentisphaerae_57_35 species=Desulfovibrio hydrothermalis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
rifcsphigho2_01_scaffold_716_10
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

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10046..10291
-----------------
DNA (246bp)
protein (82aa)
Nonribosomal peptide synthetase (PCP-TE) Tax=RBG_13_Bacteroidetes_43_22_curated
rifcsphigho2_01_scaffold_716_11
R_Melainabacteria_34_12, Melainabacteria, Bacteria

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10391..11428
-----------------
DNA (1038bp)
protein (346aa)
Uncharacterized protein n=1 Tax=Cloacamonas acidaminovorans (strain Evry) RepID=B0VGV2_CLOAI
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
rifcsphigho2_01_scaffold_716_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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11450..12361
-----------------
DNA (912bp)
protein (304aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI000364871F
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:AEW03323.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensi
rifcsphigho2_01_scaffold_716_13
Limnoraphis robusta, Limnoraphis, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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12379..13164
-----------------
DNA (786bp)
protein (262aa)
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI0002FDAE64
Uncharacterized protein {ECO:0000313|EMBL:KKD39241.1}; TaxID=1637645 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Limnoraphis.;" source="Limnoraphis robusta CS-951.;"
hypothetical protein
rifcsphigho2_01_scaffold_716_14
Methanococcus voltae, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(13179..14162)
-----------------
DNA (984bp)
protein (328aa)
nucleoside-diphosphate-sugar epimerase (EC:4.2.1.46 4.2.1.47 5.1.3.2 5.1.3.7)
NAD-dependent epimerase/dehydratase family n=1 Tax=Methanococcus voltae RepID=Q2EMU4_METVO
NAD-dependent epimerase/dehydratase family {ECO:0000313|EMBL:ABD17740.1}; TaxID=2188 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanoc
rifcsphigho2_01_scaffold_716_15
RLO_RIF03_38_15, RIF3, Bacteria

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comp(14176..15198)
-----------------
DNA (1023bp)
protein (341aa)
NAD-dependent epimerase/dehydratase (EC:3.13.1.1) Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
UDP-glucose 4-epimerase n=1 Tax=Crocosphaera watsonii WH 8502 RepID=T2ICQ6_CROWT
NAD-dependent epimerase/dehydratase
rifcsphigho2_01_scaffold_716_16
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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15397..16164
-----------------
DNA (768bp)
protein (256aa)
3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=GWA2_WOR_2_47_8_curated
3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100)
Oxidoreductase, short chain dehydrogenase/reductase family id=4083936 bin=GWC2_Planctomycete_KSU_39_26 species=Coxiella burnetii genus=Coxiella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes rbh
rifcsphigho2_01_scaffold_716_17
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

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16255..18117
-----------------
DNA (1863bp)
protein (621aa)
hypothetical protein n=1 Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI000361C5D1
radical SAM protein Tax=RBG_16_RIF03_38_10_curated
radical SAM protein
rifcsphigho2_01_scaffold_716_18
RBG_16_Planctomycetes_41_13_curated, Planctomycetes, Bacteria

Not on your lists

18102..18584
-----------------
DNA (483bp)
protein (161aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00034C7980
ADP-ribose pyrophosphatase Tax=RBG_16_Planctomycetes_41_13_curated
NUDIX hydrolase
rifcsphigho2_01_scaffold_716_19
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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18713..19588
-----------------
DNA (876bp)
protein (292aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B06 RepID=UPI00037DF49B
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
rifcsphigho2_01_scaffold_716_20
RBG_16_Planctomycetes_41_13_curated, Planctomycetes, Bacteria

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19618..20298
-----------------
DNA (681bp)
protein (227aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B06 RepID=UPI00037AA67C
type 11 methyltransferase Tax=RBG_16_Planctomycetes_41_13_curated
type 11 methyltransferase
rifcsphigho2_01_scaffold_716_21
GWF1_OD1_34_10, Moranbacteria, Parcubacteria, Bacteria

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comp(20366..21811)
-----------------
DNA (1446bp)
protein (482aa)
type 12 methyltransferase Tax=GWF1_OD1_34_10
sfu:Sfum_0151 methyltransferase type 12 id=133668 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
putative Glycosyl transferase, family 2; putative Dolichyl-phosphate beta-D-mannosyltransferase
rifcsphigho2_01_scaffold_716_22
WS6_GWF1_33_233, WS6, Bacteria

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comp(21812..22867)
-----------------
DNA (1056bp)
protein (352aa)
GDP-mannose 4,6 dehydratase (EC:4.2.1.47); K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] id=5100285 bin=WS6_GWC1_33_20 species=WS6_GWF1_33_233 genus=WS6_GWF1_33_233 taxon_order=WS6_GWF1_33_233 taxon_class=WS6_GWF1_33_233 phylum=WS6 tax=WS6_GWC1_33_20 organism_group=WS6 (Doikabacteria)
GDP-mannose 4,6 dehydratase, GDPmannose 4,6-dehydratase {ECO:0000313|EMBL:KKP44960.1}; EC=4.2.1.47 {ECO:0000313|EMBL:KKP44960.1};; TaxID=1619096 species="Bacteria; candidate division WS6.;" source="ca
GDP-mannose 4,6-dehydratase
rifcsphigho2_01_scaffold_716_23
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(22956..23888)
-----------------
DNA (933bp)
protein (311aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxI
GDP-L-fucose synthase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E8W6_METMS
NAD-dependent epimerase/dehydratase
rifcsphigho2_01_scaffold_716_24
GWA2_WOR_2_45_18_curated, WOR-2, Bacteria

Not on your lists

24096..25928
-----------------
DNA (1833bp)
protein (611aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI0003607B3A
hypothetical protein Tax=GWA2_WOR_2_45_18_curated
hypothetical protein
rifcsphigho2_01_scaffold_716_25
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(25988..26632)
-----------------
DNA (645bp)
protein (215aa)
pgmB-1; beta-phosphoglucomutase (EC:5.4.2.6)
HAD-superfamily hydrolase, subfamily IA, variant 3 id=3930250 bin=GWF2_Nitrospirae_44_13 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
HAD-superfamily hydrolase Tax=GWF2_Nitrospirae_44_13_curated
rifcsphigho2_01_scaffold_716_26
GWA2_OD1_38_13, Parcubacteria, Bacteria

Not on your lists

comp(26693..27205)
-----------------
DNA (513bp)
protein (171aa)
Putative DJ-1/PfpI family protein n=1 Tax=uncultured marine microorganism HF4000_007I05 RepID=B3T0X6_9ZZZZ
Putative DJ-1/PfpI family protein Tax=GWA2_OD1_38_13
Pfpi family intracellular protease
rifcsphigho2_01_scaffold_716_27
RLO_RIF02_62_27, RIF2, Bacteria

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comp(27309..29120)
-----------------
DNA (1812bp)
protein (604aa)
thiamine pyrophosphate binding domain-containing protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
Acetolactate synthase, large subunit id=2749815 bin=GWC2_Planctomycete_KSU_39_26 species=unknown genus=Sulfurovum taxon_order=unknown taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
thiamine pyrophosphate central domain-containing protein
rifcsphigho2_01_scaffold_716_28
RLO_RIF02_62_27, RIF2, Bacteria

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comp(29191..31845)
-----------------
DNA (2655bp)
protein (885aa)
thiamine pyrophosphate central domain-containing protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI000373F15F
thiamine pyrophosphate central domain-containing protein
rifcsphigho2_01_scaffold_716_29

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32220..33857
-----------------
DNA (1638bp)
protein (546aa)
Radical SAM domain protein id=4083853 bin=GWC2_Planctomycete_KSU_39_26 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
Uncharacterized protein {ECO:0000313|EMBL:KKN78456.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
radical SAM protein
rifcsphigho2_01_scaffold_716_30

Not on your lists

33945..34523
-----------------
DNA (579bp)
protein (193aa)
Dihydropteroate synthase-related protein {ECO:0000313|EMBL:KHO51486.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Dihydropteroate synthase-related protein id=5800740 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
dihydropteroate synthase-related protein
Displaying items 1-30 of 108 in total

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