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rifcsphigho2_01_scaffold_20348

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_20348_1
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(613..1134)
-----------------
DNA (522bp)
protein (174aa)
id=5800315 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
rifcsphigho2_01_scaffold_20348_2
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(1155..1469)
-----------------
DNA (315bp)
protein (105aa)
rpoM1; RpoM1 (EC:2.7.7.6)
DNA-directed RNA polymerase subunit n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NE53_METST
transcription termination factor Tfs; K03057 transcription elongation factor Tax=CG_Woesearch_03
rifcsphigho2_01_scaffold_20348_3
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1602..2264)
-----------------
DNA (663bp)
protein (221aa)
hypothetical protein
Peptidase S26B, eukaryotic signal peptidase id=5043727 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Peptidase S26B, eukaryotic signal peptidase Tax=AR4
rifcsphigho2_01_scaffold_20348_4
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

2421..3323
-----------------
DNA (903bp)
protein (301aa)
16S rRNA (guanine(1405)-N(7))-methyltransferase id=5044147 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rmtC
Tax=CG_Pacearch_06
rifcsphigho2_01_scaffold_20348_5
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3327..4340)
-----------------
DNA (1014bp)
protein (338aa)
Transcriptional regulator
Transcription regulator TrmB, N-terminal id=5041732 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
rifcsphigho2_01_scaffold_20348_6
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

4519..5298
-----------------
DNA (780bp)
protein (260aa)
Tax=AR9
rifcsphigho2_01_scaffold_20348_7

Not on your lists

comp(5454..7445)
-----------------
DNA (1992bp)
protein (664aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51261.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
hypothetical protein id=5047130 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Minimal nucleotidyltransferase fused to HEPN protein
rifcsphigho2_01_scaffold_20348_8
unknown

Not on your lists

7603..8277
-----------------
DNA (675bp)
protein (225aa)

This feature has no annotations

rifcsphigho2_01_scaffold_20348_9
unknown

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comp(8720..9217)
-----------------
DNA (498bp)
protein (166aa)

This feature has no annotations

rifcsphigho2_01_scaffold_20348_10
unknown

Not on your lists

comp(9410..9796)
-----------------
DNA (387bp)
protein (129aa)

This feature has no annotations

rifcsphigho2_01_scaffold_20348_11
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

10081..10530
-----------------
DNA (450bp)
protein (150aa)
Helix-turn-helix, type 11 id=5043991 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
rifcsphigho2_01_scaffold_20348_12
unknown

Not on your lists

comp(10734..10940)
-----------------
DNA (207bp)
protein (69aa)

This feature has no annotations

rifcsphigho2_01_scaffold_20348_13
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

11256..12026
-----------------
DNA (771bp)
protein (257aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000382DD02
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
INT
rifcsphigho2_01_scaffold_20348_14
GWF2_OD1_38_76, Parcubacteria, Bacteria

Not on your lists

comp(12219..12698)
-----------------
DNA (480bp)
protein (160aa)
hypothetical protein n=1 Tax=Paenibacillus sp. HW567 RepID=UPI0003736CAA
Uncharacterized protein {ECO:0000313|EMBL:KKQ81503.1}; TaxID=1618960 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_38_76.;"
hypothetical protein
rifcsphigho2_01_scaffold_20348_15
unknown

Not on your lists

comp(12818..13081)
-----------------
DNA (264bp)
protein (88aa)

This feature has no annotations

rifcsphigho2_01_scaffold_20348_16
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13108..13815)
-----------------
DNA (708bp)
protein (236aa)
hypothetical protein; K06869 uncharacterized protein Tax=AR9
hypothetical protein; K06869 uncharacterized protein id=5041645 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_01_scaffold_20348_17
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

13968..14324
-----------------
DNA (357bp)
protein (119aa)
Tax=AR9
rifcsphigho2_01_scaffold_20348_18
unknown

Not on your lists

comp(14328..14996)
-----------------
DNA (669bp)
protein (223aa)
Histidinol phosphatase and related hydrolases of the PHP family n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LR05_9FIRM Tax=ACD80
Histidinol phosphatase and related hydrolases of the PHP family n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LR05_9FIRM id=132211 bin=ACD80 species=[Ruminococcus] obeum genus=Blautia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD80 organism_group=SR1
rifcsphigho2_01_scaffold_20348_19
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(15023..15745)
-----------------
DNA (723bp)
protein (241aa)
gpm; phosphoglycerate mutase (EC:5.4.2.1) Tax=RBG_13_Pacearchaeota_36_9_curated
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=sediment metagenome RepID=D9PEW0_9ZZZZ
rifcsphigho2_01_scaffold_20348_20
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15861..16832)
-----------------
DNA (972bp)
protein (324aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales;
5,10-methylenetetrahydrofolate reductase n=1 Tax=Flexithrix dorotheae RepID=UPI00035D4E12
methylenetetrahydrofolate reductase
rifcsphigho2_01_scaffold_20348_21
R_RIF_OP11_02_38_20, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

16952..17212
-----------------
DNA (261bp)
protein (87aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_02_38_20_curated
Uncharacterized protein id=1987391 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
rifcsphigho2_01_scaffold_20348_22

Not on your lists


17315..18043
-----------------
DNA (729bp)
protein (243aa)
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
rpl11p; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=5046603 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L11
rifcsphigho2_01_scaffold_20348_23
unknown

Not on your lists

comp(18132..18620)
-----------------
DNA (489bp)
protein (163aa)

This feature has no annotations

Displaying 23 items

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