ggKbase home page

rifcsphigho2_01_scaffold_52523

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_52523_1
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

240..578
-----------------
DNA (339bp)
protein (113aa)
hypothetical protein
id=5103572 Tax=RBG_16_Pacearchaeota_35_8_curated
id=5103572 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_01_scaffold_52523_2
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

826..1461
-----------------
DNA (636bp)
protein (212aa)
peptidase S26B, signal peptidase; K13280 signal peptidase, endoplasmic reticulum-type [EC:3.4.-.-] Tax=RBG_16_Pacearchaeota_35_8_curated
hypothetical protein
id=5103328 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_01_scaffold_52523_3
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(1586..2206)
-----------------
DNA (621bp)
protein (207aa)
Metallophosphoesterase Tax=RBG_13_Pacearchaeota_33_26_curated
Metallophosphoesterase id=5799698 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Metallophosphoesterase
rifcsphigho2_01_scaffold_52523_4
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

2397..2663
-----------------
DNA (267bp)
protein (89aa)
MarR family transcriptional regulator Tax=RBG_13_Pacearchaeota_33_26_curated
regulatory protein MarR id=5046824 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsphigho2_01_scaffold_52523_5
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

2844..3104
-----------------
DNA (261bp)
protein (87aa)
Tax=AR13
rifcsphigho2_01_scaffold_52523_6
unknown

Not on your lists

3116..3478
-----------------
DNA (363bp)
protein (121aa)

This feature has no annotations

rifcsphigho2_01_scaffold_52523_7
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(3525..3836)
-----------------
DNA (312bp)
protein (104aa)
trx; thioredoxin; K03671 thioredoxin 1 Tax=RBG_13_Pacearchaeota_33_26_curated
thioredoxin 1
thioredoxin; K03671 thioredoxin 1 id=5240628 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_52523_8
RBG_19FT_COMBO_Bacteroidetes_42_10_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4049..5104)
-----------------
DNA (1056bp)
protein (352aa)
thyA; thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45] Tax=RBG_19FT_COMBO_Bacteroidetes_42_10_curated
Thymidylate synthase id=2768912 bin=GWC2_Bacteroidetes_40_22 species=gamma proteobacterium HTCC2207 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
thyA; thymidylate synthase
Displaying 8 items

View Taxonomy