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rifcsphigho2_01_scaffold_52992

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_52992_1

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1..420
-----------------
DNA (420bp)
protein (140aa)
Transposase IS200-family protein n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I5D1_DESAP
Transposase IS200-family protein {ECO:0000313|EMBL:KHO51866.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
transposase IS200-family protein
rifcsphigho2_01_scaffold_52992_2
unknown

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600..758
-----------------
DNA (159bp)
protein (53aa)

This feature has no annotations

rifcsphigho2_01_scaffold_52992_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(733..1905)
-----------------
DNA (1173bp)
protein (391aa)
Transposase ISHwa4 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3C4_9EURY
Transposase ISHwa4 {ECO:0000313|EMBL:EMA52018.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.
ISHwa4-type transposase
rifcsphigho2_01_scaffold_52992_4
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(2007..3368)
-----------------
DNA (1362bp)
protein (454aa)
IS66 family element, transposase n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z2R1_9EURY
transposase IS66 family Tax=CG_Woesearch_01
transposase IS66 family
rifcsphigho2_01_scaffold_52992_5

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comp(3365..3502)
-----------------
DNA (138bp)
protein (46aa)
Marine sediment metagenome DNA, contig: S01H1_C00196 {ECO:0000313|EMBL:GAF73485.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_01_scaffold_52992_6
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(3782..4171)
-----------------
DNA (390bp)
protein (130aa)
integrase catalytic subunit Tax=CG_Woesearch_02
rifcsphigho2_01_scaffold_52992_7

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4821..4964
-----------------
DNA (144bp)
protein (48aa)
Marine sediment metagenome DNA, contig: S01H1_S04483 {ECO:0000313|EMBL:GAF88852.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
id=5048099 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_52992_8
CG_Woesearch_02, Woesearchaeota, Archaea

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4966..5073
-----------------
DNA (108bp)
protein (36aa)
sodium/hydrogen exchanger Tax=CG_Woesearch_02
Displaying 8 items

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