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rifcsphigho2_01_scaffold_6656

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_6656_1
AR4, Woesearchaeaota, DPANN, Archaea

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3..602
-----------------
DNA (600bp)
protein (200aa)
putative signal transduction protein id=5041712 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
putative signal transduction protein Tax=AR4
rifcsphigho2_01_scaffold_6656_2
AR15, Woesearchaeaota, DPANN, Archaea

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706..1260
-----------------
DNA (555bp)
protein (185aa)
Uncharacterized protein id=5800409 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein Tax=AR15
hypothetical protein
rifcsphigho2_01_scaffold_6656_3
AR9, Woesearchaeaota, DPANN, Archaea

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1261..1710
-----------------
DNA (450bp)
protein (150aa)
seg id=5041713 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
rifcsphigho2_01_scaffold_6656_4

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comp(1745..4162)
-----------------
DNA (2418bp)
protein (806aa)
copA; copper-(or silver)-translocating P-type ATPase (EC:3.6.3.4)
ATPase n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B7A92F
Uncharacterized protein {ECO:0000313|EMBL:KKN93527.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rifcsphigho2_01_scaffold_6656_5
unknown

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comp(4217..4471)
-----------------
DNA (255bp)
protein (85aa)

This feature has no annotations

rifcsphigho2_01_scaffold_6656_6

Not on your lists

4621..5049
-----------------
DNA (429bp)
protein (143aa)
PadR-like protein family transcriptional regulator
PadR-like family transcriptional regulator id=5240645 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
PadR-like protein family transcriptional regulator {ECO:0000313|EMBL:AJF59638.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_01_scaffold_6656_7
unknown

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5102..5707
-----------------
DNA (606bp)
protein (202aa)
N-glycosylase/DNA lyase n=3 Tax=Fusobacterium RepID=C6JQ72_FUSVA id=5103568 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
N-glycosylase/DNA lyase n=3 Tax=Fusobacterium RepID=C6JQ72_FUSVA Tax=AR20
N-glycosylase/DNA lyase
rifcsphigho2_01_scaffold_6656_8
unknown

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5760..6287
-----------------
DNA (528bp)
protein (176aa)

This feature has no annotations

rifcsphigho2_01_scaffold_6656_9
AR17, Woesearchaeaota, DPANN, Archaea

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comp(6290..7345)
-----------------
DNA (1056bp)
protein (352aa)
RBG1-like GTP-binding protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LMH9_THEBM
GTP-binding protein; K06944 Tax=AR17
RBG1-like GTP-binding protein
rifcsphigho2_01_scaffold_6656_10

Not on your lists

7468..8010
-----------------
DNA (543bp)
protein (181aa)
Small-conductance mechanosensitive channel n=2 Tax=Thermococcus RepID=G0HKF9_THES4 id=5103554 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Small-conductance mechanosensitive channel
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:AJF62835.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_6656_11
unknown

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comp(8024..8215)
-----------------
DNA (192bp)
protein (64aa)

This feature has no annotations

rifcsphigho2_01_scaffold_6656_12
unknown

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comp(8235..8546)
-----------------
DNA (312bp)
protein (104aa)

This feature has no annotations

rifcsphigho2_01_scaffold_6656_13

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comp(8725..9135)
-----------------
DNA (411bp)
protein (137aa)
Putative uncharacterized protein n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0A9E6_9EURY id=5103035 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62316.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_6656_14
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(9214..9468)
-----------------
DNA (255bp)
protein (85aa)
hypothetical protein; K09721 hypothetical protein Tax=RBG_16_Micrarchaeota_36_9_curated
hypothetical protein; K09721 hypothetical protein id=5050959 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsphigho2_01_scaffold_6656_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(9502..9828)
-----------------
DNA (327bp)
protein (109aa)
Prefoldin subunit beta n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=PFDB_METKA id=5103033 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
prefoldin subunit beta; K04798 prefoldin beta subunit Tax=CG_Woesearch_02
Prefoldin subunit beta
rifcsphigho2_01_scaffold_6656_16

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comp(9832..9969)
-----------------
DNA (138bp)
protein (46aa)
hypothetical protein
id=5103032 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62313.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_6656_17
unknown

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comp(9966..10175)
-----------------
DNA (210bp)
protein (70aa)
50S ribosomal protein L37Ae n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LHQ8_THEBM id=5103031 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L37Ae n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LHQ8_THEBM Tax=AR20
50S ribosomal protein L37Ae
rifcsphigho2_01_scaffold_6656_18
unknown

Not on your lists

10499..10753
-----------------
DNA (255bp)
protein (85aa)

This feature has no annotations

rifcsphigho2_01_scaffold_6656_19
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

10750..11088
-----------------
DNA (339bp)
protein (113aa)
peptidyl-tRNA hydrolase; K04794 peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] Tax=AR17
Peptidyl-tRNA hydrolase id=5799736 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Peptidyl-tRNA hydrolase
rifcsphigho2_01_scaffold_6656_20
unknown

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11156..11596
-----------------
DNA (441bp)
protein (147aa)

This feature has no annotations

rifcsphigho2_01_scaffold_6656_21
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(11597..12037)
-----------------
DNA (441bp)
protein (147aa)
Protein with SNase domain and OB-fold nucleic acid-binding domain n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UU4_METBU
nuclease (SNase-like)
Protein with SNase domain and OB-fold nucleic acid-binding domain {ECO:0000313|EMBL:ABE52782.1}; Flags: Precursor;; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Me
rifcsphigho2_01_scaffold_6656_22

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comp(12034..12315)
-----------------
DNA (282bp)
protein (94aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EK09_9BACT
Marine sediment metagenome DNA, contig: S03H2_S28262 {ECO:0000313|EMBL:GAH80382.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_01_scaffold_6656_23
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(12318..12536)
-----------------
DNA (219bp)
protein (73aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_6656_24
unknown

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12635..13210
-----------------
DNA (576bp)
protein (192aa)

This feature has no annotations

rifcsphigho2_01_scaffold_6656_25
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

13185..13640
-----------------
DNA (456bp)
protein (152aa)
Uncharacterized protein id=5048328 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein Tax=AR18
hypothetical protein
rifcsphigho2_01_scaffold_6656_26
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

13661..14284
-----------------
DNA (624bp)
protein (208aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W3A0_UNCMA
hypothetical protein Tax=CG_Woesearch_03
hypothetical protein
rifcsphigho2_01_scaffold_6656_27
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(14268..14594)
-----------------
DNA (327bp)
protein (109aa)
hypothetical protein; K03540 ribonuclease P protein subunit RPR2 [EC:3.1.26.5] Tax=CG_Woesearch_02
ribonuclease P protein component 4 (EC:3.1.26.5)
Ribonuclease P protein component 4 id=5799801 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_6656_28
unknown

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comp(14890..15102)
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

rifcsphigho2_01_scaffold_6656_29
unknown

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comp(15344..16111)
-----------------
DNA (768bp)
protein (256aa)

This feature has no annotations

rifcsphigho2_01_scaffold_6656_30
RIFOXYD12_FULL_OD1_Wolfebacteria_48_21_curated, Wolfebacteria, Parcubacteria, Bacteria

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16157..16738
-----------------
DNA (582bp)
protein (194aa)
Uncharacterized protein n=1 Tax=Capsella rubella RepID=R0GX76_9BRAS
hypothetical protein Tax=RIFOXYD12_FULL_OD1_Wolfebacteria_48_21_curated
hypothetical protein
Displaying items 1-30 of 34 in total

View Taxonomy