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rifcsphigho2_01_scaffold_10339

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_10339_1
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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2..1075
-----------------
DNA (1074bp)
protein (358aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003621708
hypothetical protein
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_10339_2
unknown

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1089..1370
-----------------
DNA (282bp)
protein (94aa)

This feature has no annotations

rifcsphigho2_01_scaffold_10339_3

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1457..2152
-----------------
DNA (696bp)
protein (232aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pyrococcus sp. ST04 RepID=I3RFB4_9EURY id=5103026 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S01H1_S32338 {ECO:0000313|EMBL:GAG36499.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Peptidyl-prolyl cis-trans isomerase
rifcsphigho2_01_scaffold_10339_4

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2195..3283
-----------------
DNA (1089bp)
protein (363aa)
Cell division protein FtsZ n=1 Tax=sediment metagenome RepID=D9PEV5_9ZZZZ id=5103027 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_10339_5
unknown

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comp(3308..3802)
-----------------
DNA (495bp)
protein (165aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000382237A
rifcsphigho2_01_scaffold_10339_6
CG_Woesearch_02, Woesearchaeota, Archaea

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3894..4079
-----------------
DNA (186bp)
protein (62aa)
secE; preprotein translocase subunit SecE; K07342 protein transport protein SEC61 subunit gamma and related proteins Tax=CG_Woesearch_02
secE; preprotein translocase subunit SecE; K07342 protein transport protein SEC61 subunit gamma and related proteins id=5043663 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Preprotein translocase subunit SecE
rifcsphigho2_01_scaffold_10339_7
unknown

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4081..4554
-----------------
DNA (474bp)
protein (158aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003807E84
LSU ribosomal protein L24A (Rpl24A) n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29713_ARCFU Tax=AR20
LSU ribosomal protein L24A Rpl24A
rifcsphigho2_01_scaffold_10339_8
CG_Woesearch_02, Woesearchaeota, Archaea

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4556..5269
-----------------
DNA (714bp)
protein (238aa)
50S ribosomal protein L11 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369B37C
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=CG_Woesearch_02
LSU ribosomal protein L11P
rifcsphigho2_01_scaffold_10339_9
unknown

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5277..5585
-----------------
DNA (309bp)
protein (103aa)

This feature has no annotations

rifcsphigho2_01_scaffold_10339_10
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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comp(5586..6188)
-----------------
DNA (603bp)
protein (201aa)
30S ribosomal protein S2 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS2_NANEQ id=5102942 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000313|EMBL:KKR78533.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
rifcsphigho2_01_scaffold_10339_11
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(6371..7999)
-----------------
DNA (1629bp)
protein (543aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000360FC10
GroL; HSP60 family chaperonin Tax=CG_Woesearch_02
Thermosome, chaperonin Cpn60/TCP-1
rifcsphigho2_01_scaffold_10339_12
AR17, Woesearchaeaota, DPANN, Archaea

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8143..9615
-----------------
DNA (1473bp)
protein (491aa)
lysS; lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=AR17
lysine--tRNA ligase n=1 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI00028A0C2B id=5103293 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
lysine-tRNA ligase
rifcsphigho2_01_scaffold_10339_13
[Brevibacterium] flavum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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9707..10573
-----------------
DNA (867bp)
protein (289aa)
ial:IALB_1067 Myo-inositol-monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] id=719015 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
HisN; L-histidinol-phophate phosphatase (EC:3.1.3.15)
Histidinol phosphatase {ECO:0000313|EMBL:AKF26824.1}; TaxID=92706 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="[Brevibacterium] flavum.;"
rifcsphigho2_01_scaffold_10339_14
AR4, Woesearchaeaota, DPANN, Archaea

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10570..11343
-----------------
DNA (774bp)
protein (258aa)
hypothetical protein; K07024 id=5047460 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein; K07024 Tax=AR4
cof; Cof protein
rifcsphigho2_01_scaffold_10339_15
Streptococcus sp. 2_1_36FAA, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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11336..11992
-----------------
DNA (657bp)
protein (219aa)
Uncharacterized protein n=1 Tax=Streptococcus sp. 2_1_36FAA RepID=D0RS84_9STRE
Uncharacterized protein {ECO:0000313|EMBL:EEY80935.1}; TaxID=469609 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sp. 2_1_36FAA.;"
rifcsphigho2_01_scaffold_10339_16
unknown

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comp(12021..12311)
-----------------
DNA (291bp)
protein (97aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003670EAE
rifcsphigho2_01_scaffold_10339_17
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(12308..12709)
-----------------
DNA (402bp)
protein (134aa)
30S ribosomal protein S6e n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BF39_METIK
30S ribosomal protein S6
30S ribosomal protein S6e {ECO:0000256|HAMAP-Rule:MF_00512, ECO:0000256|SAAS:SAAS00018829}; TaxID=880724 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanot
rifcsphigho2_01_scaffold_10339_18
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(12711..14435)
-----------------
DNA (1725bp)
protein (575aa)
Probable translation initiation factor IF-2 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GY66_METFV id=5103748 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
InfB_2; translation initiation factor IF-2; K03243 translation initiation factor 5B Tax=CG_Woesearch_02
putative translation initiation factor IF-2
rifcsphigho2_01_scaffold_10339_19
CG_Pacearch_04, Pacearchaeota, Archaea

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14598..15191
-----------------
DNA (594bp)
protein (198aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000379ED05
major facilitator superfamily protein Tax=CG_Pacearch_04
putative permease, MFS family
rifcsphigho2_01_scaffold_10339_20
CG_Pacearch_04, Pacearchaeota, Archaea

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15172..15933
-----------------
DNA (762bp)
protein (254aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000379ED05
major facilitator superfamily protein Tax=CG_Pacearch_04
MFS transporter
Displaying 20 items

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