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rifcsphigho2_01_scaffold_9390

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_9390_1
unknown

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comp(2..409)
-----------------
DNA (408bp)
protein (136aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9390_2
AR18, Woesearchaeaota, DPANN, Archaea

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comp(532..993)
-----------------
DNA (462bp)
protein (154aa)
IS200-type transposase; K07491 putative transposase id=5047348 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
IS200-type transposase; K07491 putative transposase Tax=AR18
rifcsphigho2_01_scaffold_9390_3
unknown

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1219..1449
-----------------
DNA (231bp)
protein (77aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9390_4

Not on your lists

1436..2251
-----------------
DNA (816bp)
protein (272aa)
ATPase, AAA-type, core id=5799675 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61006.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsphigho2_01_scaffold_9390_5
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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2253..2951
-----------------
DNA (699bp)
protein (233aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000375EC05
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsphigho2_01_scaffold_9390_6
unknown

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3049..3357
-----------------
DNA (309bp)
protein (103aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9390_7

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comp(3383..4768)
-----------------
DNA (1386bp)
protein (462aa)
Aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A {ECO:0000313|EMBL:KHO55627.1}; EC=6.3.5.6 {ECO:0000313|EMBL:KHO55627.1};; Flags: Fragment;; TaxID=1579379 species="Archaea.;" source="
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A (EC:6.3.5.6)
Glutamyl-tRNA(Gln) amidotransferase subunit A id=5799876 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_9390_8

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comp(4765..5049)
-----------------
DNA (285bp)
protein (95aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C (EC:6.3.5.6)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C id=5799877 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_9390_9

Not on your lists


comp(5050..6819)
-----------------
DNA (1770bp)
protein (590aa)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:KHO50641.1}; EC=6.1.1.12 {ECO:0000313|EMBL:KHO50641.1};; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003663F84
rifcsphigho2_01_scaffold_9390_10

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comp(6816..7370)
-----------------
DNA (555bp)
protein (185aa)
hypothetical protein id=5047338 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54116.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
haloacid dehalogenase
rifcsphigho2_01_scaffold_9390_11
unknown

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7435..7785
-----------------
DNA (351bp)
protein (117aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9390_12
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

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7871..8056
-----------------
DNA (186bp)
protein (62aa)
hypothetical protein Tax=RBG_13_WOR_2_41_10_curated
rifcsphigho2_01_scaffold_9390_13
Bacillus akibai, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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8124..8867
-----------------
DNA (744bp)
protein (248aa)
Lytic transglycosylase, catalytic n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11N48_MESSB
lytic transglycosylase, catalytic
Uncharacterized protein {ECO:0000313|EMBL:GAE37062.1}; TaxID=1236973 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus akibai (strain ATCC 43226 / DSM 21942
rifcsphigho2_01_scaffold_9390_14
CG_Pacearch_05, Pacearchaeota, Archaea

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8910..10076
-----------------
DNA (1167bp)
protein (389aa)
Uncharacterized protein n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HKD5_PYRSN id=5102913 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=CG_Pacearch_05
hypothetical protein
rifcsphigho2_01_scaffold_9390_15
unknown

Not on your lists

10124..10264
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9390_16

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10266..10811
-----------------
DNA (546bp)
protein (182aa)
peptidase M50 family id=5044074 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Peptidase M50 family {ECO:0000313|EMBL:KHO54636.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
rifcsphigho2_01_scaffold_9390_17

Not on your lists

comp(10779..11372)
-----------------
DNA (594bp)
protein (198aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036D7941
Transcription factor E {ECO:0000256|SAAS:SAAS00008967}; Flags: Fragment;; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Transcription factor E
rifcsphigho2_01_scaffold_9390_18
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

11498..12043
-----------------
DNA (546bp)
protein (182aa)
id=5102918 Tax=RBG_16_Pacearchaeota_35_8_curated
id=5046266 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_01_scaffold_9390_19
unknown

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12040..12387
-----------------
DNA (348bp)
protein (116aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9390_20
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists


12429..14207
-----------------
DNA (1779bp)
protein (593aa)
alaS; alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=CG_Pacearch_03
Alanine--tRNA ligase n=1 Tax=uncultured bacterium RepID=K1YK36_9BACT
Alanine-tRNA ligase
rifcsphigho2_01_scaffold_9390_21
GWA1_OP11_39_32_plus, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(14245..14520)
-----------------
DNA (276bp)
protein (92aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036C2C4E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKR15041.1}; TaxID=1618454 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWA1_39_32.;"
rifcsphigho2_01_scaffold_9390_22
unknown

Not on your lists

comp(14534..14923)
-----------------
DNA (390bp)
protein (130aa)

This feature has no annotations

Displaying 22 items

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