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rifcsphigho2_01_scaffold_37456

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_37456_1
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(2..538)
-----------------
DNA (537bp)
protein (179aa)
AMP phosphohydrolase; K00758 thymidine phosphorylase [EC:2.4.2.4] Tax=CG_Woesearch_02
AMP phosphohydrolase; K00758 thymidine phosphorylase [EC:2.4.2.4] id=5043588 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
AMP phosphorylase
rifcsphigho2_01_scaffold_37456_2
unknown

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comp(528..1538)
-----------------
DNA (1011bp)
protein (337aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAG4_HALJB id=5102898 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAG4_HALJB Tax=AR20
hypothetical protein
rifcsphigho2_01_scaffold_37456_3

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comp(1589..2314)
-----------------
DNA (726bp)
protein (242aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] id=5041873 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KKM79699.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rifcsphigho2_01_scaffold_37456_4
unknown

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2442..2969
-----------------
DNA (528bp)
protein (176aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036C6F0E
rifcsphigho2_01_scaffold_37456_5
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(2975..3277)
-----------------
DNA (303bp)
protein (101aa)
id=5046822 Tax=CG_Woesearch_01
id=5046822 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_01_scaffold_37456_6
RHI_OD1_Moranbacteria_40_10, Moranbacteria, Parcubacteria, Bacteria

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3372..3899
-----------------
DNA (528bp)
protein (176aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OD1_Moranbacteria_40_10_curated
hemerythrin HHE cation binding domain protein id=96536 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
cation-binding protein
rifcsphigho2_01_scaffold_37456_7
RHI_OD1_Moranbacteria_40_10, Moranbacteria, Parcubacteria, Bacteria

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3896..4210
-----------------
DNA (315bp)
protein (105aa)
nitric oxide dioxygenase (EC:1.14.12.17) Tax=RIFCSPHIGHO2_12_FULL_OD1_Moranbacteria_40_10_curated
nitric oxide dioxygenase (EC:1.14.12.17) id=96529 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
nitric oxide dioxygenase (EC:1.14.12.17)
rifcsphigho2_01_scaffold_37456_8
unknown

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comp(4211..4795)
-----------------
DNA (585bp)
protein (195aa)

This feature has no annotations

rifcsphigho2_01_scaffold_37456_9
CG_Pacearch_02, Pacearchaeota, Archaea

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comp(4893..6080)
-----------------
DNA (1188bp)
protein (396aa)
ribulose bisphosphate carboxylase, type III (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] Tax=CG_Pacearch_02
rbcL; ribulose bisophosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] id=5040672 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
ribulose bisphosphate carboxylase, type III (EC:4.1.1.39)
rifcsphigho2_01_scaffold_37456_10
unknown

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6293..7093
-----------------
DNA (801bp)
protein (267aa)

This feature has no annotations

rifcsphigho2_01_scaffold_37456_11
unknown

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comp(7135..7737)
-----------------
DNA (603bp)
protein (201aa)
Haloacid dehalogenase-like hydrolase, putative n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IH75_ACIB4 id=5103441 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Haloacid dehalogenase-like hydrolase, putative n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IH75_ACIB4 Tax=AR20
hypothetical protein
rifcsphigho2_01_scaffold_37456_12
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(7774..8604)
-----------------
DNA (831bp)
protein (277aa)
translation initiation factor, aIF-2BII family (EC:5.3.1.23)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003603816
translation initiation factor IF-2B subunit delta; K03680 translation initiation factor eIF-2B subunit delta Tax=CG_Woesearch_02
rifcsphigho2_01_scaffold_37456_13
Thermoplasmatales archaeon E-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(8641..9225)
-----------------
DNA (585bp)
protein (195aa)
peptidylprolyl isomerase (EC:5.2.1.8)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon E-plasma RepID=T0MUY2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB67061.1}; TaxID=667137 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon E-pl
rifcsphigho2_01_scaffold_37456_14
Cyanothece sp. PCC 8801, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(9319..10017)
-----------------
DNA (699bp)
protein (233aa)
ferredoxin n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI000344B82D
FHA domain-containing protein
FHA domain containing protein {ECO:0000313|EMBL:ACK68154.1}; TaxID=41431 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 8801)
rifcsphigho2_01_scaffold_37456_15
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

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10069..10425
-----------------
DNA (357bp)
protein (119aa)
Putative membrane protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F3U0_9DELT
hypothetical protein Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
hypothetical protein
rifcsphigho2_01_scaffold_37456_16
GWB1_OP11_47_15, Beckwithbacteria, Microgenomates, Bacteria

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10371..10787
-----------------
DNA (417bp)
protein (139aa)
hypothetical protein id=15191508 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
Uncharacterized protein {ECO:0000313|EMBL:KKU61697.1}; TaxID=1618371 species="Bacteria; Microgenomates.;" source="Microgenomates (Beckwithbacteria) bacterium GW2011_GWB1_47_15.;"
hypothetical protein
Displaying 16 items

View Taxonomy