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rifcsphigho2_01_scaffold_28026

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_28026_1
CG_Woesearch_02, Woesearchaeota, Archaea

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1..951
-----------------
DNA (951bp)
protein (317aa)
histone acetyltransferase, elp3 family (EC:2.3.1.48)
hypothetical protein Tax=CG_Woesearch_02
Histone acetyltransferase Elp3 like protein id=5800668 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_28026_2
AR20, Woesearchaeaota, DPANN, Archaea

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1084..1389
-----------------
DNA (306bp)
protein (102aa)
hypothetical protein
id=5103695 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsphigho2_01_scaffold_28026_3

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1485..1778
-----------------
DNA (294bp)
protein (98aa)
50S ribosomal protein L21e n=2 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RL21_NANEQ id=5103694 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
50S ribosomal protein L21e
rifcsphigho2_01_scaffold_28026_4

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1780..2121
-----------------
DNA (342bp)
protein (114aa)
Conserved protein n=2 Tax=Methanothermobacter RepID=O27379_METTH id=5103693 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62971.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_28026_5

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2142..2708
-----------------
DNA (567bp)
protein (189aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037717BA
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AJF62970.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_28026_6
Nanoarchaeum equitans, Nanoarchaeum, Nanoarchaeota, Archaea

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2865..3344
-----------------
DNA (480bp)
protein (160aa)
30S ribosomal protein S13 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A4ACD
rps13p; 30S ribosomal protein S13P
30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315}; TaxID=228908 species="Archaea; Nanoarchaeota; Nanoarchaeum.;" source="Nanoarchaeum equitans (strain Kin4-M).;"
rifcsphigho2_01_scaffold_28026_7
AR18, Woesearchaeaota, DPANN, Archaea

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3346..3987
-----------------
DNA (642bp)
protein (214aa)
rps4p; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=5051520 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rps4p; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=AR18
30S ribosomal protein S4
rifcsphigho2_01_scaffold_28026_8
CG_Woesearch_01, Woesearchaeota, Archaea

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3984..4385
-----------------
DNA (402bp)
protein (134aa)
rps11p; 30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=CG_Woesearch_01
rps11p; 30S ribosomal protein S11P; K02948 small subunit ribosomal protein S11 id=5051521 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S11
rifcsphigho2_01_scaffold_28026_9
AR17, Woesearchaeaota, DPANN, Archaea

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4342..5169
-----------------
DNA (828bp)
protein (276aa)
rpoD; DNA-directed RNA polymerase subunit D (EC:2.7.7.6); K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=AR17
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] id=5049647 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit D
rifcsphigho2_01_scaffold_28026_10
unknown

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5381..5698
-----------------
DNA (318bp)
protein (106aa)

This feature has no annotations

rifcsphigho2_01_scaffold_28026_11

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5695..6051
-----------------
DNA (357bp)
protein (119aa)
50S ribosomal protein L18e n=2 Tax=Staphylothermus RepID=A3DMQ7_STAMF id=5103681 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L18e
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_28026_12
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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6045..6461
-----------------
DNA (417bp)
protein (139aa)
50S ribosomal protein L13P n=10 Tax=Thermococcus RepID=RL13_PYRKO id=5103680 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rpl13p; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RBG_13_Woesearchaeota_36_6_curated
50S ribosomal protein L13P
rifcsphigho2_01_scaffold_28026_13
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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6458..6847
-----------------
DNA (390bp)
protein (130aa)
30S ribosomal protein S9 n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=RS9_THESM
rps9p; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000255|HAMAP-Rule:MF_00532}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (
rifcsphigho2_01_scaffold_28026_14
unknown

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comp(7036..7380)
-----------------
DNA (345bp)
protein (115aa)

This feature has no annotations

Displaying 14 items

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