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rifcsphigho2_01_scaffold_8043

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_8043_1
unknown

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comp(3..104)
-----------------
DNA (102bp)
protein (34aa)

This feature has no annotations

rifcsphigho2_01_scaffold_8043_2

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comp(107..1378)
-----------------
DNA (1272bp)
protein (424aa)
hypothetical protein
id=5045282 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54489.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
rifcsphigho2_01_scaffold_8043_3

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comp(1378..2067)
-----------------
DNA (690bp)
protein (230aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN93570.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ABC transporter, ATPase subunit; K02003 putative ABC transport system ATP-binding protein id=5047430 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ABC transport system protein
rifcsphigho2_01_scaffold_8043_4

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2137..2526
-----------------
DNA (390bp)
protein (130aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037BCC2D
tRNA (Adenine-57, 58-N(1)-) methyltransferase
tRNA (Adenine-57, 58-N(1)-) methyltransferase {ECO:0000313|EMBL:AJF63079.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_8043_5

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2487..2852
-----------------
DNA (366bp)
protein (122aa)
tRNA (adenine-N(1)-)-methyltransferase (EC:2.1.1.36); K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] id=5046750 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA (Adenine57-N1/adenine58-N1)-methyltransferase {ECO:0000313|EMBL:KHO45938.1}; EC=2.1.1.219 {ECO:0000313|EMBL:KHO45938.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
tRNA (adenine-N(1)-)-methyltransferase
rifcsphigho2_01_scaffold_8043_6
AR18, Woesearchaeaota, DPANN, Archaea

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2891..4687
-----------------
DNA (1797bp)
protein (599aa)
ATPase; K06865 ATPase id=5045271 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ATPase; K06865 ATPase Tax=AR18
hypothetical protein
rifcsphigho2_01_scaffold_8043_7
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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4775..5761
-----------------
DNA (987bp)
protein (329aa)
id=3688775 Tax=RBG_13_Pacearchaeota_36_9_curated
id=3688775 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_01_scaffold_8043_8
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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5834..6682
-----------------
DNA (849bp)
protein (283aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000288F093
hypothetical protein Tax=RBG_16_Micrarchaeota_36_9_curated
conserved hypothetical protein
rifcsphigho2_01_scaffold_8043_9
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

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6747..8462
-----------------
DNA (1716bp)
protein (572aa)
DNA polymerase X family / putative histidinol phosphatase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46C05_METBF id=5103471 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
PHP domain-containing protein; K02347 DNA polymerase (family X) Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
hypothetical protein
rifcsphigho2_01_scaffold_8043_10
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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8632..10788
-----------------
DNA (2157bp)
protein (719aa)
RHS repeat-associated core domain protein Tax=RBG_16_RIF_OP11_02_41_13_curated
RHS repeat-associated core domain-containing protein id=5102320 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
RHS repeat-associated core domain protein
rifcsphigho2_01_scaffold_8043_11
Pyrococcus sp. ST04, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(10775..12574)
-----------------
DNA (1800bp)
protein (600aa)
Uncharacterized protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RFC3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK22933.1}; TaxID=1183377 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. ST04.;"
rifcsphigho2_01_scaffold_8043_12
AR20, Woesearchaeaota, DPANN, Archaea

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comp(12608..13162)
-----------------
DNA (555bp)
protein (185aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A9583
hypothetical protein
Tax=AR20
rifcsphigho2_01_scaffold_8043_13
unknown

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13567..15933
-----------------
DNA (2367bp)
protein (789aa)
Valine--tRNA ligase n=1 Tax=uncultured archaeon RepID=D1J9A9_9ARCH id=5103313 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Valine--tRNA ligase n=1 Tax=uncultured archaeon RepID=D1J9A9_9ARCH Tax=AR20
Valine-tRNA ligase
rifcsphigho2_01_scaffold_8043_14
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(15962..16270)
-----------------
DNA (309bp)
protein (103aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI00035E3AEB
ATPase; K06921 Tax=CG_Aenigma_01
ATPase
rifcsphigho2_01_scaffold_8043_15
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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16387..16656
-----------------
DNA (270bp)
protein (90aa)
IS66 family element, transposase n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4C0N6_METCG
IS66 family element, transposase
IS66 family element, transposase {ECO:0000313|EMBL:AEB67750.1}; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta
rifcsphigho2_01_scaffold_8043_16
AR17, Woesearchaeaota, DPANN, Archaea

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16602..18194
-----------------
DNA (1593bp)
protein (531aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003774E83
Peptide chain release factor subunit 1 Tax=AR17
Peptide chain release factor subunit 1
rifcsphigho2_01_scaffold_8043_17
unknown

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comp(18520..18714)
-----------------
DNA (195bp)
protein (65aa)

This feature has no annotations

Displaying 17 items

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