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rifcsphigho2_01_scaffold_5287

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_5287_1
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(3..728)
-----------------
DNA (726bp)
protein (242aa)
m4C-methyltransferase; K07319 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72] Tax=RBG_16_Ignavibacteria_34_14_curated
DNA modification methylase id=18248967 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
m4C-methyltransferase
rifcsphigho2_01_scaffold_5287_2
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

1011..1430
-----------------
DNA (420bp)
protein (140aa)
Putative transposase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IND8_NITGG id=5103518 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
transposase Tax=CG_Pacearch_06
rifcsphigho2_01_scaffold_5287_3
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1475..2347)
-----------------
DNA (873bp)
protein (291aa)
methionine aminopeptidase, type II (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=AR18
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036FA425
Methionine aminopeptidase
rifcsphigho2_01_scaffold_5287_4
unknown

Not on your lists

comp(2357..3238)
-----------------
DNA (882bp)
protein (294aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5287_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(3244..5709)
-----------------
DNA (2466bp)
protein (822aa)
DNA polymerase Pol2; K02319 DNA polymerase I [EC:2.7.7.7] Tax=CG_Woesearch_02
DNA polymerase n=3 Tax=Pyrococcus RepID=DPOL_PYRFU id=5103201 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA polymerase
rifcsphigho2_01_scaffold_5287_6
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5745..6398)
-----------------
DNA (654bp)
protein (218aa)
hypothetical protein
id=5103202 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsphigho2_01_scaffold_5287_7

Not on your lists

6480..7484
-----------------
DNA (1005bp)
protein (335aa)
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025
Flap endonuclease 1 n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AGN5_PYRYC id=5103204 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Flap endonuclease 1
rifcsphigho2_01_scaffold_5287_8
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

7484..8377
-----------------
DNA (894bp)
protein (298aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E485F
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein
rifcsphigho2_01_scaffold_5287_9
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

8379..9194
-----------------
DNA (816bp)
protein (272aa)
Met-10+ protein id=5800111 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Met-10+ protein Tax=AR15
hypothetical protein
rifcsphigho2_01_scaffold_5287_10
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9204..9698)
-----------------
DNA (495bp)
protein (165aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAE4_METMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE36145.1}; Flags: Precursor;; TaxID=547558 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalophilus.;" sou
rifcsphigho2_01_scaffold_5287_11
unknown

Not on your lists

comp(9740..10303)
-----------------
DNA (564bp)
protein (188aa)
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8N8_METEZ id=5103211 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8N8_METEZ Tax=AR20
Ribosomal RNA large subunit methyltransferase E
rifcsphigho2_01_scaffold_5287_12
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10305..10712)
-----------------
DNA (408bp)
protein (136aa)
id=5043700 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR17
rifcsphigho2_01_scaffold_5287_13

Not on your lists

comp(10703..11224)
-----------------
DNA (522bp)
protein (174aa)
Marine sediment metagenome DNA, contig: S01H1_S31847 {ECO:0000313|EMBL:GAG31143.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein id=5043701 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_01_scaffold_5287_14
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(11261..12580)
-----------------
DNA (1320bp)
protein (440aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E4370
hypothetical protein; K06915 Tax=CG_Pacearch_05
hypothetical protein
rifcsphigho2_01_scaffold_5287_15
unknown

Not on your lists

comp(12595..12756)
-----------------
DNA (162bp)
protein (54aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5287_16
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

12973..13926
-----------------
DNA (954bp)
protein (318aa)
rfc; replication factor C small subunit; K04801 replication factor C small subunit Tax=AR17
rfc; replication factor C small subunit; K04801 replication factor C small subunit id=5048862 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Replication factor C small subunit
rifcsphigho2_01_scaffold_5287_17
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

13923..14495
-----------------
DNA (573bp)
protein (191aa)
hypothetical protein
id=5103217 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsphigho2_01_scaffold_5287_18
Thermococcus kodakarensis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(14599..15030)
-----------------
DNA (432bp)
protein (144aa)
Putative uncharacterized protein n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JJC5_THEKO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAD85664.1}; TaxID=69014 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus kodakare
rifcsphigho2_01_scaffold_5287_19
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(15027..15410)
-----------------
DNA (384bp)
protein (128aa)
Nucleotidyltransferase n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A3T3_THESM
Nucleotidyltransferase
Nucleotidyltransferase {ECO:0000313|EMBL:ACS90278.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strain
rifcsphigho2_01_scaffold_5287_20
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

15501..16691
-----------------
DNA (1191bp)
protein (397aa)
Replication factor C large subunit Tax=AR11
replication factor C large subunit; K04800 replication factor C large subunit id=5047300 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
replication factor C large subunit
rifcsphigho2_01_scaffold_5287_21
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(16688..16897)
-----------------
DNA (210bp)
protein (70aa)
Tax=AR19
rifcsphigho2_01_scaffold_5287_22
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(16884..17219)
-----------------
DNA (336bp)
protein (112aa)
id=5044649 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR19
rifcsphigho2_01_scaffold_5287_23

Not on your lists

comp(17352..18188)
-----------------
DNA (837bp)
protein (279aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Protease HtpX homolog id=5799559 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Heat shock protein HtpX
rifcsphigho2_01_scaffold_5287_24
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(18337..18660)
-----------------
DNA (324bp)
protein (108aa)
id=4744551 Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_5287_25
unknown

Not on your lists

comp(18657..18941)
-----------------
DNA (285bp)
protein (95aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5287_26

Not on your lists

19847..20041
-----------------
DNA (195bp)
protein (65aa)
hypothetical protein
id=5103088 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62369.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_5287_27
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

20038..20580
-----------------
DNA (543bp)
protein (181aa)
hypothetical protein
id=5103088 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
Displaying 27 items

View Taxonomy