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rifcsphigho2_01_scaffold_51542

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_51542_1
AR18, Woesearchaeaota, DPANN, Archaea

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comp(22..267)
-----------------
DNA (246bp)
protein (82aa)
IS200-type transposase; K07491 putative transposase Tax=AR18
IS200-type transposase; K07491 putative transposase id=5047348 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_01_scaffold_51542_2
unknown

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comp(729..1175)
-----------------
DNA (447bp)
protein (149aa)

This feature has no annotations

rifcsphigho2_01_scaffold_51542_3
unknown

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comp(1166..1555)
-----------------
DNA (390bp)
protein (130aa)

This feature has no annotations

rifcsphigho2_01_scaffold_51542_4

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1999..3762
-----------------
DNA (1764bp)
protein (588aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52052.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
RNase L inhibitor; K06174 ATP-binding cassette, sub-family E, member 1 id=5048286 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ATPase
rifcsphigho2_01_scaffold_51542_5
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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3869..5686
-----------------
DNA (1818bp)
protein (606aa)
ribonucleoside-diphosphate reductase; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=RBG_13_Pacearchaeota_33_26_curated
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase id=4731939 bin=GWA2_Planctomycete_KSU_39_15 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
rifcsphigho2_01_scaffold_51542_6
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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5692..7842
-----------------
DNA (2151bp)
protein (717aa)
ribonucleoside-diphosphate reductase (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-N05 RepID=UPI00036A1263
rifcsphigho2_01_scaffold_51542_7
CG_CPR10_01, CG_CPR10, Bacteria

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7846..8397
-----------------
DNA (552bp)
protein (184aa)
dUTP diphosphatase (EC:3.6.1.23)
dcd2; deoxycytidine deaminase Tax=CG_CPR10_01
Deoxycytidine deaminase id=2025463 bin=GWD2_CPR2_39_7 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
rifcsphigho2_01_scaffold_51542_8
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8451..9320
-----------------
DNA (870bp)
protein (290aa)
thymidylate synthase-like protein; K00560 thymidylate synthase [EC:2.1.1.45] Tax=RBG_13_Deltaproteobacteria_58_19_curated
thymidylate synthase (EC:2.1.1.-)
Putative thymidylate synthase id=4735751 bin=GWC2_OP3_44_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
rifcsphigho2_01_scaffold_51542_9
unknown

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9317..9652
-----------------
DNA (336bp)
protein (112aa)

This feature has no annotations

rifcsphigho2_01_scaffold_51542_10
CG_Caldi_01, Caldisericum, Caldisericales, Caldisericia, Caldiserica, Bacteria

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9716..9922
-----------------
DNA (207bp)
protein (69aa)
ferredoxin; K05337 ferredoxin Tax=CG_Caldi_01
rifcsphigho2_01_scaffold_51542_11
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(9927..10565)
-----------------
DNA (639bp)
protein (213aa)
deoxyhypusine synthase (EC:2.5.1.46); K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=CG_Woesearch_01
Probable deoxyhypusine synthase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E894_METEZ id=5102987 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
putative deoxyhypusine synthase
rifcsphigho2_01_scaffold_51542_12
unknown

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comp(10525..10833)
-----------------
DNA (309bp)
protein (103aa)
Probable deoxyhypusine synthase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E894_METEZ id=5102987 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Probable deoxyhypusine synthase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E894_METEZ Tax=AR20
putative deoxyhypusine synthase
rifcsphigho2_01_scaffold_51542_13
unknown

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comp(10830..10991)
-----------------
DNA (162bp)
protein (54aa)

This feature has no annotations

Displaying 13 items

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