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rifcsphigho2_01_scaffold_58014

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_58014_1
unknown

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1..99
-----------------
DNA (99bp)
protein (33aa)

This feature has no annotations

rifcsphigho2_01_scaffold_58014_2
unknown

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117..1937
-----------------
DNA (1821bp)
protein (607aa)

This feature has no annotations

rifcsphigho2_01_scaffold_58014_3
AR19, Pacearchaeaota, DPANN, Archaea

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comp(1943..2509)
-----------------
DNA (567bp)
protein (189aa)
Tax=AR19
rifcsphigho2_01_scaffold_58014_4
AR18, Woesearchaeaota, DPANN, Archaea

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comp(3175..4239)
-----------------
DNA (1065bp)
protein (355aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] id=5049690 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=AR18
Tryptophan-tRNA ligase
rifcsphigho2_01_scaffold_58014_5
unknown

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comp(4246..4410)
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

rifcsphigho2_01_scaffold_58014_6
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(4407..6062)
-----------------
DNA (1656bp)
protein (552aa)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZPR9_THELI id=5103639 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
phenylalanyl-tRNA synthetase subunit beta Tax=CG_Woesearch_01
Phenylalanine-tRNA ligase beta subunit
rifcsphigho2_01_scaffold_58014_7
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(6064..6807)
-----------------
DNA (744bp)
protein (248aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=CG_Woesearch_03
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) RepID=H9UME2_SPIAZ
phenylalanyl-tRNA synthetase subunit alpha
rifcsphigho2_01_scaffold_58014_8
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(6838..7563)
-----------------
DNA (726bp)
protein (242aa)
Phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=CG_Woesearch_02
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037CA4E5
Suspect SCG annotation. See neighboring gene [rifcsphigho2_01_scaffold_58014_7].
Phenylalanine-tRNA ligase alpha subunit
rifcsphigho2_01_scaffold_58014_9
unknown

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comp(7629..8558)
-----------------
DNA (930bp)
protein (310aa)

This feature has no annotations

rifcsphigho2_01_scaffold_58014_10
unknown

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comp(8613..8792)
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

rifcsphigho2_01_scaffold_58014_11
unknown

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comp(8796..9155)
-----------------
DNA (360bp)
protein (120aa)

This feature has no annotations

rifcsphigho2_01_scaffold_58014_12
blood disease bacterium R229, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9249..10145)
-----------------
DNA (897bp)
protein (299aa)
Uncharacterized protein n=1 Tax=blood disease bacterium R229 RepID=G2ZXH9_9RALS
Uncharacterized protein {ECO:0000313|EMBL:CCA83758.1}; TaxID=741978 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="blood disease bacteri
hypothetical protein
rifcsphigho2_01_scaffold_58014_13

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comp(10158..10973)
-----------------
DNA (816bp)
protein (272aa)
hypothetical protein id=5042335 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46833.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_01_scaffold_58014_14
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

11146..11526
-----------------
DNA (381bp)
protein (127aa)
ribonuclease P protein component 2 (EC:3.1.26.5); K03537 ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] id=5045732 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ribonuclease P/MRP protein subunit POP5 (EC:3.1.26.5)
Ribonuclease P protein component 2 Tax=AR17
rifcsphigho2_01_scaffold_58014_15

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11528..11617
-----------------
DNA (90bp)
protein (30aa)
Marine sediment metagenome DNA, contig: S01H1_S10576 {ECO:0000313|EMBL:GAG03141.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Displaying 15 items

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