ggKbase home page

rifcsphigho2_01_scaffold_58458

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_58458_1
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(24..299)
-----------------
DNA (276bp)
protein (92aa)
Elongation factor 1-beta id=5799999 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Elongation factor 1-beta Tax=AR15
Elongation factor 1-beta
rifcsphigho2_01_scaffold_58458_2
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(708..965)
-----------------
DNA (258bp)
protein (86aa)
Uncharacterized protein n=1 Tax=Ferroplasma sp. Type II RepID=T0NH92_9EURY
RelE protein; K06218 RelE protein Tax=CG_Woesearch_02
RelE protein
rifcsphigho2_01_scaffold_58458_3
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(965..1186)
-----------------
DNA (222bp)
protein (74aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TZ66_9EURY
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein
rifcsphigho2_01_scaffold_58458_4

Not on your lists

comp(1340..2326)
-----------------
DNA (987bp)
protein (329aa)
DNA repair and recombination protein RadA; K04483 DNA repair protein RadA id=5046762 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
radA; DNA repair and recombination protein RadA
rifcsphigho2_01_scaffold_58458_5
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2329..2565)
-----------------
DNA (237bp)
protein (79aa)
hypothetical protein
id=5103130 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsphigho2_01_scaffold_58458_6
PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, Peregrinibacteria, Bacteria

Not on your lists

comp(3168..3425)
-----------------
DNA (258bp)
protein (86aa)
id=4795192 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
id=4795192 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_01_scaffold_58458_7

Not on your lists

comp(3700..4179)
-----------------
DNA (480bp)
protein (160aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO48932.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
HEPN id=5041756 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_58458_8
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4172..4786)
-----------------
DNA (615bp)
protein (205aa)
Nucleotidyl transferase domain id=5041755 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
rifcsphigho2_01_scaffold_58458_9
unknown

Not on your lists

comp(5328..5780)
-----------------
DNA (453bp)
protein (151aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B8EEE
Membrane-bound metal-dependent hydrolase n=394 Tax=Staphylococcus aureus RepID=A5IUW1_STAA9 Tax=AR20
Membrane-bound metal-dependent hydrolase
rifcsphigho2_01_scaffold_58458_10
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5836..6996)
-----------------
DNA (1161bp)
protein (387aa)
NAD-dependent malic enzyme (EC:1.1.1.38)
NAD-dependent malic enzyme n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YDS9_DICT6 rbh
Malate dehydrogenase {ECO:0000313|EMBL:KGJ48414.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
rifcsphigho2_01_scaffold_58458_11
unknown

Not on your lists

comp(7091..7306)
-----------------
DNA (216bp)
protein (72aa)

This feature has no annotations

Displaying 11 items

View Taxonomy