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rifcsphigho2_01_scaffold_16060_10

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_38_8

partial RP 34 / 55 MC: 6 BSCG 7 / 51 ASCG 29 / 38 MC: 3
Location: 4960..5976

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase D TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=5050697 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 327.0
  • Bit_score: 253
  • Evalue 2.80e-64
tRNA pseudouridine13 synthase {ECO:0000313|EMBL:KHO53366.1}; EC=5.4.99.27 {ECO:0000313|EMBL:KHO53366.1};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.9
  • Coverage: 327.0
  • Bit_score: 253
  • Evalue 4.00e-64
tRNA pseudouridine synthase D TruD similarity KEGG
DB: KEGG
  • Identity: 27.5
  • Coverage: 389.0
  • Bit_score: 119
  • Evalue 1.80e-24

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Taxonomy

archaeon GW2011_AR18 → Archaea

Sequences

DNA sequence
Length: 1017
ATGTACAAGATCAAGCAAATTCCAGAGGACTTCATAGTAGAAGAAATCCCGAATATAAATCTAAGCAAAGGCGGAGATTATAGTTATTTCTTCATTGAAAAGAAGAACTGGAACACACAAGATGTAATCAGGGAATTAGCAAGGCGTTTGCATGTGAAAGAAAATATCTTTAACATAGCAGGCATAAAGGACAAGAATGCAATCACCAGACAAGTAGTCTCTGCATACAAGATGCCCCAGCAAGTTATAGCTAAAATAAAGATAAAGGACGTTAAAATAAATTTCATAGGCAGGGGCAATGACCGCATAAAGCTTGGCCAGATAATAAAGAATAATTTTACGATAACAGTAAGGAACCTTGACAGTAAGGAACACAACAAAATAGATTTCATAGAAAATTATTTTGATGAGCAGCGTTTTGGAGGCACGAACCAGCTTATAGGCAGTGCATTGGTCAAGAAGGATTTTCCTGAAGCATGCAGCCTTCTTGGATTGAATGTTGAAAAAAATGATTACATCGGCGCAATAAGAAACAATGTAAACAGGAAGATGCTAGTGTTTTATGTCAATGCCTACCAAAGCCTGCTGTTCAACAAGGCTGTTTCAGGGTACATAAAATTAAAATCCGCAGATTTCCTTGATGTCAAATCAGAAAACACGAATTTCACATTCACAAATTCAGCGATAGAAAACATAAAGGTCCCTATTATAGGCTTTCTTAGCGTCATAAGGAACAAGGAAATAAAAAAGATATACACCCATATTCTTGCAAAGGAAGGCATAAAAAAAGAAGATTTCTTGTTTCCAATGATGCCTGAGCTAAGCTCAGAAGGCAATGAGCGCGACTTAATAGTAAAAGTCAATGTTTCGATAACCTTCGAGAACGACGAGATCAACAAGAACAAGCTTAAAGCAATATTAAGTTTCTCGCTTGACAAGGGAGCTTACGCAACCATTGTCATAAAAAAGATGTTTTGTAATAATCAGCCAATAGCGAATGATTCACAAAAAGCTTAA
PROTEIN sequence
Length: 339
MYKIKQIPEDFIVEEIPNINLSKGGDYSYFFIEKKNWNTQDVIRELARRLHVKENIFNIAGIKDKNAITRQVVSAYKMPQQVIAKIKIKDVKINFIGRGNDRIKLGQIIKNNFTITVRNLDSKEHNKIDFIENYFDEQRFGGTNQLIGSALVKKDFPEACSLLGLNVEKNDYIGAIRNNVNRKMLVFYVNAYQSLLFNKAVSGYIKLKSADFLDVKSENTNFTFTNSAIENIKVPIIGFLSVIRNKEIKKIYTHILAKEGIKKEDFLFPMMPELSSEGNERDLIVKVNVSITFENDEINKNKLKAILSFSLDKGAYATIVIKKMFCNNQPIANDSQKA*