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rifcsphigho2_01_scaffold_16060

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_16060_1

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comp(1..576)
-----------------
DNA (576bp)
protein (192aa)
Uncharacterized protein n=2 Tax=Methanobacterium RepID=K2QFB8_METFO id=5103144 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62425.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_16060_2
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(599..775)
-----------------
DNA (177bp)
protein (59aa)
Ribosome biogenesis protein Nop10 n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RX37_FERPA
RNA-binding protein Nop10p
Ribosome biogenesis protein Nop10 {ECO:0000256|HAMAP-Rule:MF_00803}; TaxID=589924 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus p
rifcsphigho2_01_scaffold_16060_3

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comp(778..1566)
-----------------
DNA (789bp)
protein (263aa)
Translation initiation factor 2 subunit alpha n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IFN2_ACIB4 id=5103146 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Translation initiation factor 2 subunit alpha
Translation initiation factor 2 subunit alpha {ECO:0000313|EMBL:AJF62427.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_16060_4
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(1568..1753)
-----------------
DNA (186bp)
protein (62aa)
30S ribosomal protein S27e n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEZ2_9EURY id=5103147 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rps27e; 30S ribosomal protein S27e; K02978 small subunit ribosomal protein S27e Tax=CG_Woesearch_01
30S ribosomal protein S27e
rifcsphigho2_01_scaffold_16060_5
unknown

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comp(1755..2066)
-----------------
DNA (312bp)
protein (104aa)
LSU ribosomal protein L44E n=1 Tax=nanoarchaeote Nst1 RepID=R1G2S0_9ARCH id=5103148 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
LSU ribosomal protein L44E n=1 Tax=nanoarchaeote Nst1 RepID=R1G2S0_9ARCH Tax=AR20
LSU ribosomal protein L44E
rifcsphigho2_01_scaffold_16060_6
unknown

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comp(2063..2299)
-----------------
DNA (237bp)
protein (79aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16060_7
unknown

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comp(2482..3096)
-----------------
DNA (615bp)
protein (205aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUK4_9ARCH id=5103149 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUK4_9ARCH Tax=AR20
hypothetical protein
rifcsphigho2_01_scaffold_16060_8
CG_Micra_06, Micraarchaeota, Archaea

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comp(3119..4267)
-----------------
DNA (1149bp)
protein (383aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1); K15635 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=CG_Micra_06
phosphonopyruvate decarboxylase-like protein (EC:5.4.2.1)
Phosphonopyruvate decarboxylase-related protein id=2235421 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
rifcsphigho2_01_scaffold_16060_9
unknown

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comp(4305..4907)
-----------------
DNA (603bp)
protein (201aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16060_10

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4960..5976
-----------------
DNA (1017bp)
protein (339aa)
tRNA pseudouridine synthase D TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=5050697 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
tRNA pseudouridine13 synthase {ECO:0000313|EMBL:KHO53366.1}; EC=5.4.99.27 {ECO:0000313|EMBL:KHO53366.1};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
tRNA pseudouridine synthase D TruD
rifcsphigho2_01_scaffold_16060_11
unknown

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6004..6417
-----------------
DNA (414bp)
protein (138aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16060_12
AR18, Woesearchaeaota, DPANN, Archaea

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6449..7657
-----------------
DNA (1209bp)
protein (403aa)
ftsY; signal recognition particle receptor FtsY; K03110 fused signal recognition particle receptor id=5050700 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ftsY; signal recognition particle receptor FtsY; K03110 fused signal recognition particle receptor Tax=AR18
Signal recognition particle GTPase
rifcsphigho2_01_scaffold_16060_13

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comp(7695..8282)
-----------------
DNA (588bp)
protein (196aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZL37_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD49761.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
lemA protein
rifcsphigho2_01_scaffold_16060_14

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comp(8427..9254)
-----------------
DNA (828bp)
protein (276aa)
Uncharacterized protein n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LVF0_HIPMA
Uncharacterized protein {ECO:0000313|EMBL:KHO50487.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein
rifcsphigho2_01_scaffold_16060_15
unknown

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9291..9686
-----------------
DNA (396bp)
protein (132aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16060_16
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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9734..10402
-----------------
DNA (669bp)
protein (223aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036745B5
DNA polymerase beta domain-containing protein region Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
rifcsphigho2_01_scaffold_16060_17
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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10392..10844
-----------------
DNA (453bp)
protein (151aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037D880D
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
Displaying 17 items

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