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rifcsphigho2_01_scaffold_21581

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_21581_1

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comp(3..224)
DNA (222bp) protein (74aa)
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
rifcsphigho2_01_scaffold_21581_2

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comp(229..1200)
DNA (972bp) protein (324aa)
Small subunit ribosomal protein S3 {ECO:0000313|EMBL:KHO55758.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
small subunit ribosomal protein S3
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 id=5241356 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_21581_3

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comp(1200..1670)
DNA (471bp) protein (157aa)
50S ribosomal protein L22P, large subunit ribosomal protein L22
rpl22p; 50S ribosomal protein L22P; K02890 large subunit ribosomal protein L22 id=5241355 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
50S ribosomal protein L22 {ECO:0000256|RuleBase:RU004007}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rifcsphigho2_01_scaffold_21581_4

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comp(1675..2073)
DNA (399bp) protein (133aa)
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
small subunit ribosomal protein S19
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 id=5241354 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_21581_5

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comp(2079..2807)
DNA (729bp) protein (243aa)
large subunit ribosomal protein L2
LSU ribosomal protein l2p; K02886 large subunit ribosomal protein L2 id=5241353 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_01_scaffold_21581_6

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comp(2807..3085)
DNA (279bp) protein (93aa)
Large subunit ribosomal protein L23 {ECO:0000313|EMBL:KHO55754.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
large subunit ribosomal protein L23
50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 id=5241352 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_21581_7

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comp(3092..3886)
DNA (795bp) protein (265aa)
large subunit ribosomal protein L4e
LSU ribosomal protein l4p; K02930 large subunit ribosomal protein L4e id=5241351 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rifcsphigho2_01_scaffold_21581_8

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comp(3883..5028)
DNA (1146bp) protein (382aa)
large subunit ribosomal protein L3
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5241350 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
50S ribosomal protein L3 {ECO:0000256|SAAS:SAAS00023038}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rifcsphigho2_01_scaffold_21581_9
AR10, Diapherotrites, DPANN, Archaea

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comp(5412..6911)
DNA (1500bp) protein (500aa)
archaeal flagellar protein FlaI
secretory protein kinase; K07332 archaeal flagellar protein FlaI Tax=AR10
secretory protein kinase; K07332 archaeal flagellar protein FlaI id=5241680 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_21581_10

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7048..8445
DNA (1398bp) protein (466aa)
tRNA nucleotidyltransferase CCA-adding enzyme (EC:2.7.7.72)
CCA-adding enzyme (EC:2.7.7.72); K07558 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] id=5241679 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
rifcsphigho2_01_scaffold_21581_11
unknown

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8451..8732
DNA (282bp) protein (94aa)

This feature has no annotations

rifcsphigho2_01_scaffold_21581_12
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

9064..9327
DNA (264bp) protein (88aa)
hypothetical protein
Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange id=5241677 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange Tax=AR10
rifcsphigho2_01_scaffold_21581_13
unknown

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9365..9622
DNA (258bp) protein (86aa)

This feature has no annotations

rifcsphigho2_01_scaffold_21581_14
unknown

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9653..9892
DNA (240bp) protein (80aa)

This feature has no annotations

rifcsphigho2_01_scaffold_21581_15
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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9934..12324
DNA (2391bp) protein (797aa)
SMC domain protein n=1 Tax=mine drainage metagenome RepID=T0ZS85_9ZZZZ rbh
DNA double-strand break repair rad50 ATPase; K03546 exonuclease SbcC Tax=CG_Aenigma_01
chromosome segregation protein
rifcsphigho2_01_scaffold_21581_16

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comp(12328..12522)
DNA (195bp) protein (65aa)
hypothetical protein
Ribosomal protein S17e id=5241674 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
30S ribosomal protein S17e {ECO:0000256|SAAS:SAAS00278999}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_01_scaffold_21581_17

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comp(12523..12732)
DNA (210bp) protein (70aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO55733.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
DNA-directed RNA polymerase subunit K
DNA-directed RNA polymerase subunit K id=5241673 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_21581_18
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(12822..14333)
DNA (1512bp) protein (504aa)
hypothetical protein
id=5241672 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
rifcsphigho2_01_scaffold_21581_19
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(14394..14621)
DNA (228bp) protein (76aa)
hypothetical protein; K07339 hypothetical protein Tax=AR19
hypothetical protein; K07339 hypothetical protein id=5048874 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsphigho2_01_scaffold_21581_20

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comp(14614..14835)
DNA (222bp) protein (74aa)
hypothetical protein
hypothetical protein id=5241834 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60825.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_01_scaffold_21581_21
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

15388..16155
DNA (768bp) protein (256aa)
archaeal cell division control protein 6
ORC complex protein Cdc6/Orc1; K10725 archaeal cell division control protein 6 id=5241737 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
ORC complex protein Cdc6/Orc1; K10725 archaeal cell division control protein 6 Tax=AR10
rifcsphigho2_01_scaffold_21581_22
unknown

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comp(16175..16549)
DNA (375bp) protein (125aa)

This feature has no annotations

rifcsphigho2_01_scaffold_21581_23
unknown

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16598..17281
DNA (684bp) protein (228aa)

This feature has no annotations

rifcsphigho2_01_scaffold_21581_24
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

17313..18734
DNA (1422bp) protein (474aa)
rfcL; replication factor C large subunit
rfcL; replication factor C large subunit; K04800 replication factor C large subunit id=5241743 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rfcL; replication factor C large subunit; K04800 replication factor C large subunit Tax=AR10
rifcsphigho2_01_scaffold_21581_25
unknown

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comp(18726..19169)
DNA (444bp) protein (148aa)

This feature has no annotations

rifcsphigho2_01_scaffold_21581_26
unknown

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comp(19288..20430)
DNA (1143bp) protein (381aa)

This feature has no annotations

rifcsphigho2_01_scaffold_21581_27
Mesotoga prima, Mesotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

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20557..22287
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=Mesotoga prima MesG1.Ag.4.2 RepID=I2F208_9THEM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK05961.1}; Flags: Precursor;; TaxID=660470 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Mesotoga.;" source="Mesotoga prima MesG1.Ag.4.2.;"
rifcsphigho2_01_scaffold_21581_28
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

22328..23656
DNA (1329bp) protein (443aa)
solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
anion transporter; K14445 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 id=5240574 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
anion transporter; K14445 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 Tax=AR10
rifcsphigho2_01_scaffold_21581_29
CG_Micra_01, Micraarchaeota, Archaea

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comp(23736..24116)
DNA (381bp) protein (127aa)
Ribonuclease VapC n=1 Tax=Ignisphaera aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1) RepID=E0STX7_IGNAA
PilT protein domain-containing protein
Tax=CG_Micra_01
rifcsphigho2_01_scaffold_21581_30
unknown

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comp(24113..24277)
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying 30 items

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