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rifcsphigho2_01_scaffold_9982

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_9982_1

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comp(3..1124)
-----------------
DNA (1122bp)
protein (374aa)
S-adenosylmethionine synthetase; K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] id=5049197 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
S-adenosylmethionine synthetase {ECO:0000313|EMBL:KHO45188.1}; EC=2.5.1.6 {ECO:0000313|EMBL:KHO45188.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
metK; methionine adenosyltransferase (EC:2.5.1.6)
rifcsphigho2_01_scaffold_9982_2

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comp(1170..1901)
-----------------
DNA (732bp)
protein (244aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003650638
Uncharacterized protein {ECO:0000313|EMBL:KHO50759.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
Phosphoesterase
rifcsphigho2_01_scaffold_9982_3

Not on your lists

comp(1898..2896)
-----------------
DNA (999bp)
protein (333aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
Probable tRNA pseudouridine synthase B id=5799607 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
putative tRNA pseudouridine synthase B
rifcsphigho2_01_scaffold_9982_4
unknown

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3013..4212
-----------------
DNA (1200bp)
protein (400aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9982_5
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(4227..4727)
-----------------
DNA (501bp)
protein (167aa)
RPL31A; 50S ribosomal protein L31; K02910 large subunit ribosomal protein L31e Tax=CG_Woesearch_01
Ribosomal protein L31e id=5800693 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Ribosomal protein L31e
rifcsphigho2_01_scaffold_9982_6

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comp(4905..5528)
-----------------
DNA (624bp)
protein (208aa)
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
30S ribosomal protein S19; K02966 small subunit ribosomal protein S19e id=5049179 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S19
rifcsphigho2_01_scaffold_9982_7
unknown

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5682..7331
-----------------
DNA (1650bp)
protein (550aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9982_8
CG_Woesearch_02, Woesearchaeota, Archaea

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7353..8297
-----------------
DNA (945bp)
protein (315aa)
calcineurin-like phosphoesterase Tax=CG_Woesearch_02
metallophosphoesterase id=31198 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
calcineurin-like phosphoesterase
rifcsphigho2_01_scaffold_9982_9
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8342..8851)
-----------------
DNA (510bp)
protein (170aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6R6_METEZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI73288.1}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium
rifcsphigho2_01_scaffold_9982_10
unknown

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comp(8899..9204)
-----------------
DNA (306bp)
protein (102aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9982_11

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9333..9632
-----------------
DNA (300bp)
protein (100aa)
id=5048700 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45363.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_01_scaffold_9982_12
unknown

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comp(9629..9766)
-----------------
DNA (138bp)
protein (46aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9982_13
GWC2_OD1_ACD81_39_22, Wolfebacteria, Parcubacteria, Bacteria

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comp(9809..10246)
-----------------
DNA (438bp)
protein (146aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XUV7_9BACT
Putative uncharacterized protein Tax=GWC2_OD1_ACD81_39_22
hypothetical protein
rifcsphigho2_01_scaffold_9982_14
RBG_13_RIF_OD1_08_37_53_curated, RIF-OD1-8, Parcubacteria, Bacteria

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10286..10774
-----------------
DNA (489bp)
protein (163aa)
Uncharacterized protein id=4453357 bin=GWC2_Deltaproteobacteria_42_51 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein Tax=RBG_13_RIF_OD1_08_37_53_curated
hypothetical protein
rifcsphigho2_01_scaffold_9982_15

Not on your lists

10744..11181
-----------------
DNA (438bp)
protein (146aa)
Ribonuclease P protein component 2 {ECO:0000256|HAMAP-Rule:MF_00755}; Short=RNase P component 2 {ECO:0000256|HAMAP-Rule:MF_00755};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00755};; Pop5 {ECO:0000256|HA
Ribonuclease P protein component 2
Ribonuclease P protein component 2 id=5046930 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_01_scaffold_9982_16

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11210..11917
-----------------
DNA (708bp)
protein (236aa)
psmA; proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] id=5046929 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289};; 20S proteasome alpha subunit {ECO:0000256|HAMAP-Rule:MF_00289}; Proteasome core protein PsmA
Proteasome subunit alpha
rifcsphigho2_01_scaffold_9982_17
CG_Woesearch_02, Woesearchaeota, Archaea

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11920..12639
-----------------
DNA (720bp)
protein (240aa)
RNA-associated protein; K14574 ribosome maturation protein SDO1 Tax=CG_Woesearch_02
RNA-associated protein; K14574 ribosome maturation protein SDO1 id=5046928 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
RNA-associated protein
rifcsphigho2_01_scaffold_9982_18

Not on your lists

12644..13432
-----------------
DNA (789bp)
protein (263aa)
rpr43; exosome RNA binding protein (EC:3.1.13.-); K03679 exosome complex component RRP4 id=5046927 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
putative exosome complex RNA-binding protein 1
rifcsphigho2_01_scaffold_9982_19

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13486..14136
-----------------
DNA (651bp)
protein (217aa)
Rph; exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 id=5046926 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Exosome complex exonuclease Rrp41, exosome complex component RRP41 {ECO:0000313|EMBL:KHO45872.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
exosome complex exonuclease Rrp41
rifcsphigho2_01_scaffold_9982_20

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14138..14446
-----------------
DNA (309bp)
protein (103aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E0285
Exosome complex component Rrp42 {ECO:0000256|HAMAP-Rule:MF_00622}; TaxID=285386 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos27G5.;"
exosome complex RNA-binding protein Rrp42
rifcsphigho2_01_scaffold_9982_21

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14415..14783
-----------------
DNA (369bp)
protein (123aa)
Exosome complex component RRP42 {ECO:0000313|EMBL:KHO45871.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 id=5046925 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
exosome complex RNA-binding protein Rrp42
rifcsphigho2_01_scaffold_9982_22
CG_Woesearch_01, Woesearchaeota, Archaea

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14819..15037
-----------------
DNA (219bp)
protein (73aa)
DNA-directed RNA polymerase subunit K; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] Tax=CG_Woesearch_01
DNA-directed RNA polymerase subunit K; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] id=5045738 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsphigho2_01_scaffold_9982_23
unknown

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comp(15079..15222)
-----------------
DNA (144bp)
protein (48aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9982_24
unknown

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comp(15289..15624)
-----------------
DNA (336bp)
protein (112aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9982_25

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comp(15649..15951)
-----------------
DNA (303bp)
protein (101aa)
Marine sediment metagenome DNA, contig: S01H1_S36597 {ECO:0000313|EMBL:GAG44746.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein id=15190257 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
rifcsphigho2_01_scaffold_9982_26
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(15989..16579)
-----------------
DNA (591bp)
protein (197aa)
hypothetical protein; K07176 putative serine/threonine protein kinase Tax=RBG_13_Woesearchaeota_36_6_curated
Ser/Thr protein kinase-like protein; K07176 putative serine/threonine protein kinase id=5043578 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_01_scaffold_9982_27
unknown

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comp(16576..16908)
-----------------
DNA (333bp)
protein (111aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9982_28
CG_Pacearch_04, Pacearchaeota, Archaea

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comp(16934..17458)
-----------------
DNA (525bp)
protein (175aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003669D41
hypothetical protein Tax=CG_Pacearch_04
hypothetical protein
rifcsphigho2_01_scaffold_9982_29
unknown

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17528..17953
-----------------
DNA (426bp)
protein (142aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9982_30
AR20, Woesearchaeaota, DPANN, Archaea

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comp(17904..18344)
-----------------
DNA (441bp)
protein (147aa)
hypothetical protein
id=5103449 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
Displaying items 1-30 of 32 in total

View Taxonomy