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rifcsphigho2_01_scaffold_21932

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_21932_1
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..336)
-----------------
DNA (336bp)
protein (112aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018107}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018107};; TaxID=96561 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobac
Dihydrodipicolinate reductase n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZYU5_DESOH
dihydrodipicolinate reductase
rifcsphigho2_01_scaffold_21932_2
AR15, Woesearchaeaota, DPANN, Archaea

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comp(421..645)
-----------------
DNA (225bp)
protein (75aa)
Uncharacterized protein id=5799776 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein Tax=AR15
hypothetical protein
rifcsphigho2_01_scaffold_21932_3
PER_GWF2_38_29, Peregrinibacteria, Bacteria

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726..938
-----------------
DNA (213bp)
protein (71aa)
phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] id=5802340 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=PER_GWF2_38_29
triosephosphate isomerase (EC:5.3.1.1 2.7.2.3)
rifcsphigho2_01_scaffold_21932_4
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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1019..1849
-----------------
DNA (831bp)
protein (277aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000255|HAMAP-Rule:MF_00145}; EC=2.7.2.3 {ECO:0000255|HAMAP-Rule:MF_00145};; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaeroba
Phosphoglycerate kinase n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=PGK_THETN
rifcsphigho2_01_scaffold_21932_5
unknown

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2026..3018
-----------------
DNA (993bp)
protein (331aa)

This feature has no annotations

rifcsphigho2_01_scaffold_21932_6
unknown

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2964..4925
-----------------
DNA (1962bp)
protein (654aa)
Uncharacterized protein (Fragment) n=1 Tax=Anas platyrhynchos RepID=U3J280_ANAPL
rifcsphigho2_01_scaffold_21932_7
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(4922..5146)
-----------------
DNA (225bp)
protein (75aa)
UPF0235 protein MSWAN_0547 Tax=CG_Woesearch_02
rifcsphigho2_01_scaffold_21932_8

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comp(5139..5462)
-----------------
DNA (324bp)
protein (108aa)
Marine sediment metagenome DNA, contig: S01H1_S38339 {ECO:0000313|EMBL:GAG48814.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
DNA-directed RNA polymerase subunit id=5799719 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Transcription-associated protein TFIIS
rifcsphigho2_01_scaffold_21932_9
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(5464..6081)
-----------------
DNA (618bp)
protein (206aa)
peptidase S26B, signal peptidase; K13280 signal peptidase, endoplasmic reticulum-type [EC:3.4.-.-] Tax=CG_Woesearch_02
hypothetical protein
id=5103328 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_01_scaffold_21932_10
CG_Woesearch_02, Woesearchaeota, Archaea

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6142..6750
-----------------
DNA (609bp)
protein (203aa)
NMD3-related protein; K07562 nonsense-mediated mRNA decay protein 3 Tax=CG_Woesearch_02
NMD3-related protein (nonsense mediated mRNA decay); K07562 nonsense-mediated mRNA decay protein 3 id=5043728 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_01_scaffold_21932_11
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

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comp(6738..7331)
-----------------
DNA (594bp)
protein (198aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036FFB32
phosphoesterase PA-phosphatase-like protein Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
membrane protein
rifcsphigho2_01_scaffold_21932_12
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(7328..8593)
-----------------
DNA (1266bp)
protein (422aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
CCA-adding enzyme n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WSV3_9EURY
tRNA nucleotidyltransferase CCA-adding enzyme
rifcsphigho2_01_scaffold_21932_13
unknown

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comp(8633..8881)
-----------------
DNA (249bp)
protein (83aa)

This feature has no annotations

rifcsphigho2_01_scaffold_21932_14
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(8865..10052)
-----------------
DNA (1188bp)
protein (396aa)
id=5046326 Tax=CG_Woesearch_02
id=5046326 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_01_scaffold_21932_15
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(10045..12762)
-----------------
DNA (2718bp)
protein (906aa)
Parallel beta-helix repeat protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KNG1_ARCVS
hypothetical protein Tax=CG_Woesearch_02
parallel beta-helix repeat-containing protein
Displaying 15 items

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