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rifcsphigho2_01_scaffold_25752

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_25752_1
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(2..274)
-----------------
DNA (273bp)
protein (91aa)
hypothetical protein
hypothetical protein Tax=CG_Woesearch_01
id=5102964 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_01_scaffold_25752_2
unknown

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comp(318..1193)
-----------------
DNA (876bp)
protein (292aa)

This feature has no annotations

rifcsphigho2_01_scaffold_25752_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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1302..2270
-----------------
DNA (969bp)
protein (323aa)
Transcriptional regulator n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TC38_9EURY
putative AsnC family transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA Tax=RBG_13_Pacearchaeota_36_9_curated
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
rifcsphigho2_01_scaffold_25752_4
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(2267..3217)
-----------------
DNA (951bp)
protein (317aa)
id=5046901 Tax=CG_Woesearch_01
id=5046901 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_01_scaffold_25752_5
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(3208..4803)
-----------------
DNA (1596bp)
protein (532aa)
id=5046900 Tax=CG_Woesearch_01
rifcsphigho2_01_scaffold_25752_6

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comp(4794..5876)
-----------------
DNA (1083bp)
protein (361aa)
id=5046899 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45845.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_01_scaffold_25752_7
unknown

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comp(5869..6234)
-----------------
DNA (366bp)
protein (122aa)

This feature has no annotations

rifcsphigho2_01_scaffold_25752_8
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(6248..6655)
-----------------
DNA (408bp)
protein (136aa)
Putative uncharacterized protein Tax=CG_Woesearch_01
Putative uncharacterized protein id=5046897 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_01_scaffold_25752_9
unknown

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6746..7366
-----------------
DNA (621bp)
protein (207aa)

This feature has no annotations

rifcsphigho2_01_scaffold_25752_10
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(7578..8795)
-----------------
DNA (1218bp)
protein (406aa)
adenosylhomocysteinase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] Tax=CG_Woesearch_03
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase id=5800327 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_25752_11

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comp(8795..9103)
-----------------
DNA (309bp)
protein (103aa)
phosphorylated carbohydrates phosphatase (EC:3.1.3.-)
Haloacid dehalogenase n=1 Tax=sediment metagenome RepID=D9PHG7_9ZZZZ
Haloacid dehalogenase {ECO:0000313|EMBL:EFK97002.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
rifcsphigho2_01_scaffold_25752_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9063..9398)
-----------------
DNA (336bp)
protein (112aa)
Putative phosphatase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GYD8_SORC5
phosphatase
Putative phosphatase {ECO:0000313|EMBL:CAN97224.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellu
rifcsphigho2_01_scaffold_25752_13
Pyrococcus abyssi, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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9618..10097
-----------------
DNA (480bp)
protein (160aa)
Uncharacterized protein n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9UZC3_PYRAB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAB50136.1}; TaxID=272844 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus abyssi (strain GE5 /
rifcsphigho2_01_scaffold_25752_14
Thermoplasmatales archaeon SCGC AB-539-N05, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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10094..13897
-----------------
DNA (3804bp)
protein (1268aa)
Concanavalin A-like lectin/glucanases superfamily (Fragment) n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7U5R2_9EURY
Concanavalin A-like lectin/glucanases superfamily {ECO:0000313|EMBL:EMR74155.1}; Flags: Fragment;; TaxID=1198116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermopla
hypothetical protein
Displaying 14 items

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