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rifcsphigho2_01_scaffold_15544

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_15544_1
unknown

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1..642
-----------------
DNA (642bp)
protein (214aa)

This feature has no annotations

rifcsphigho2_01_scaffold_15544_2
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(604..1167)
-----------------
DNA (564bp)
protein (188aa)
DNA-binding protein n=3 Tax=Pyrococcus RepID=Q8TZW3_PYRFU id=5103692 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-binding protein; K07572 putative nucleotide binding protein Tax=RBG_13_Woesearchaeota_36_6_curated
DNA-binding protein
rifcsphigho2_01_scaffold_15544_3
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(1224..1577)
-----------------
DNA (354bp)
protein (118aa)
hypothetical protein
RNA polymerase II, Rpb4 Tax=CG_Woesearch_02
RNA polymerase II, Rpb4 id=5799707 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_15544_4
AR15, Woesearchaeaota, DPANN, Archaea

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comp(1579..1869)
-----------------
DNA (291bp)
protein (97aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003600E98
LSU ribosomal protein L21E Tax=AR15
50S ribosomal protein L21
rifcsphigho2_01_scaffold_15544_5
unknown

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comp(1926..2786)
-----------------
DNA (861bp)
protein (287aa)

This feature has no annotations

rifcsphigho2_01_scaffold_15544_6
unknown

Not on your lists

comp(2776..3420)
-----------------
DNA (645bp)
protein (215aa)

This feature has no annotations

rifcsphigho2_01_scaffold_15544_7
unknown

Not on your lists

3578..3733
-----------------
DNA (156bp)
protein (52aa)

This feature has no annotations

rifcsphigho2_01_scaffold_15544_8
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

3819..5330
-----------------
DNA (1512bp)
protein (504aa)
Putative uncharacterized protein Tax=CG_Woesearch_01
seg id=5800821 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_15544_9
unknown

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5324..5800
-----------------
DNA (477bp)
protein (159aa)

This feature has no annotations

rifcsphigho2_01_scaffold_15544_10
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

5797..7839
-----------------
DNA (2043bp)
protein (681aa)
AP endonuclease family enzyme
Putative uncharacterized protein Tax=CG_Woesearch_01
Xylose isomerase-like, TIM barrel domain id=5043952 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_15544_11
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

7884..8690
-----------------
DNA (807bp)
protein (269aa)
DNA polymerase beta domain protein region Tax=CG_Woesearch_01
DNA polymerase beta domain protein region id=5046032 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA polymerase beta protein
rifcsphigho2_01_scaffold_15544_12
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

8713..9273
-----------------
DNA (561bp)
protein (187aa)
hypothetical protein Tax=CG_Woesearch_02
tRNA methylase id=5046019 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_01_scaffold_15544_13
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(9270..10916)
-----------------
DNA (1647bp)
protein (549aa)
caaA2; trimeric autotransporter adhesin Tax=CG_Woesearch_03
putative hemolysin id=5045996 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
GK12566 gene product from transcript GK12566-RA
rifcsphigho2_01_scaffold_15544_14
unknown

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comp(10954..11622)
-----------------
DNA (669bp)
protein (223aa)

This feature has no annotations

rifcsphigho2_01_scaffold_15544_15
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

11909..13804
-----------------
DNA (1896bp)
protein (632aa)
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PUB6_METMA
DNA gyrase subunit B Tax=CG_Woesearch_01
rifcsphigho2_01_scaffold_15544_16
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


14069..14752
-----------------
DNA (684bp)
protein (228aa)
rps3ae; 30S ribosomal protein S3AE; K02984 small subunit ribosomal protein S3Ae Tax=AR11
Ribosomal protein S3AE id=5799806 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ribosomal protein S3AE
rifcsphigho2_01_scaffold_15544_17
unknown

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comp(14749..15018)
-----------------
DNA (270bp)
protein (90aa)

This feature has no annotations

Displaying 17 items

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