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rifcsphigho2_01_scaffold_19593

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_19593_1
unknown

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1..78
-----------------
DNA (78bp)
protein (26aa)

This feature has no annotations

rifcsphigho2_01_scaffold_19593_2
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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154..1914
-----------------
DNA (1761bp)
protein (587aa)
RNase L inhibitor; K06174 ATP-binding cassette, sub-family E, member 1 Tax=RBG_13_Woesearchaeota_36_6_curated
RNase L inhibitor; K06174 ATP-binding cassette, sub-family E, member 1 id=5047426 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ATPase RIL
rifcsphigho2_01_scaffold_19593_3

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1911..2312
-----------------
DNA (402bp)
protein (134aa)
Uncharacterized protein id=5800439 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61770.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
nucleic acid-binding protein
rifcsphigho2_01_scaffold_19593_4
CG_Woesearch_02, Woesearchaeota, Archaea

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2312..2875
-----------------
DNA (564bp)
protein (188aa)
DNA-directed RNA polymerase subunit E'; K03049 DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] Tax=CG_Woesearch_02
DNA-directed RNA polymerase subunit E id=5800440 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit E
rifcsphigho2_01_scaffold_19593_5
AR15, Woesearchaeaota, DPANN, Archaea

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2876..3058
-----------------
DNA (183bp)
protein (61aa)
DNA-directed RNA polymerase, subunit E id=5800441 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase, subunit E Tax=AR15
DNA-directed RNA polymerase, subunit E
rifcsphigho2_01_scaffold_19593_6

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3061..3402
-----------------
DNA (342bp)
protein (114aa)
rps24e; 30S ribosomal protein S24E; K02974 small subunit ribosomal protein S24e id=5047529 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
30S ribosomal protein S24E
rifcsphigho2_01_scaffold_19593_7

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3402..3620
-----------------
DNA (219bp)
protein (73aa)
30S ribosomal protein S27ae n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BU95_METCG
30S ribosomal protein S27ae {ECO:0000256|HAMAP-Rule:MF_00777}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
rpmA; 30S ribosomal protein S27a
rifcsphigho2_01_scaffold_19593_8
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(3617..4222)
-----------------
DNA (606bp)
protein (202aa)
O-sialoglycoprotein endopeptidase; K07174 Mn2+-dependent serine/threonine protein kinase [EC:2.7.1.-] Tax=CG_Woesearch_02
O-sialoglycoprotein endopeptidase/protein kinase (EC:3.4.24.57); K15904 bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein [EC:2.7.11.1] id=5042054 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein
rifcsphigho2_01_scaffold_19593_9
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(4329..4733)
-----------------
DNA (405bp)
protein (135aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|SAAS:SAAS00103216}; EC=3.5.4.19 {ECO:0000256|SAAS:SAAS00103216};; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae;
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZDC3_9BACT
phosphoribosyl-AMP cyclohydrolase
rifcsphigho2_01_scaffold_19593_10
GWA1_OD1_48_13, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(4777..5472)
-----------------
DNA (696bp)
protein (232aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037009BB
Aspartate racemase {ECO:0000313|EMBL:KKU94220.1}; TaxID=1618661 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_13.;"
racD-1; aspartate racemase
rifcsphigho2_01_scaffold_19593_11
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5469..6503)
-----------------
DNA (1035bp)
protein (345aa)
ATP phosphoribosyltransferase; K00765 ATP phosphoribosyltransferase [EC:2.4.2.17] Tax=RBG_16_Anaeromyxobacter_69_14_curated
rifcsphigho2_01_scaffold_19593_12

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6802..7905
-----------------
DNA (1104bp)
protein (368aa)
cysteine synthase; K01738 cysteine synthase A [EC:2.5.1.47] id=5045701 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Cysteine synthase {ECO:0000313|EMBL:KHO51823.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
cysteine synthase
rifcsphigho2_01_scaffold_19593_13
unknown

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7978..8766
-----------------
DNA (789bp)
protein (263aa)

This feature has no annotations

rifcsphigho2_01_scaffold_19593_14
R_OD1_Wolfebacteria_42_16, Wolfebacteria, Parcubacteria, Bacteria

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comp(9028..9612)
-----------------
DNA (585bp)
protein (195aa)
putative Ig family protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Wolfebacteria_42_16_curated
Displaying 14 items

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