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rifcsphigho2_01_scaffold_18412

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_18412_1
CG_Elusi_03, Elusimicrobia, Bacteria

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3..551
-----------------
DNA (549bp)
protein (183aa)
PurL; phosphoribosylformylglycinamidine synthase domain-containing protein; K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=CG_Elusi_03
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LPP2_SYNAS
rifcsphigho2_01_scaffold_18412_2
AR11, Woesearchaeaota, DPANN, Archaea

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548..1318
-----------------
DNA (771bp)
protein (257aa)
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit PurE (EC:5.4.99.18); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] Tax=AR11
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21 5.4.99.18)
phosphoribosylaminoimidazole carboxylase (EC:4.1.1.21); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] id=5240827 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_18412_3
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1290..2255
-----------------
DNA (966bp)
protein (322aa)
phosphoribosylaminoimidazolesuccinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002696}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002685};;
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JFZ6_ANAD2
rifcsphigho2_01_scaffold_18412_4
unknown

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2345..3004
-----------------
DNA (660bp)
protein (220aa)

This feature has no annotations

rifcsphigho2_01_scaffold_18412_5
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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3168..4193
-----------------
DNA (1026bp)
protein (342aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase; K06863 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.-] Tax=RIFOXYC2_FULL_Peregrinibacter
tba:TERMP_02032 phosphoribosylaminoimidazolecarboxamide formyltransferase id=74012 bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
phosphoribosylaminoimidazolecarboxamide formyltransferase
rifcsphigho2_01_scaffold_18412_6

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4190..5317
-----------------
DNA (1128bp)
protein (376aa)
ATP-utilizing enzymes of ATP-grasp superfamily (Probably carboligase) n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T917_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KHO51655.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase
rifcsphigho2_01_scaffold_18412_7
RBG_16_OP11_Woesebacteria_34_12_curated, Woesebacteria, Microgenomates, Bacteria

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5314..6327
-----------------
DNA (1014bp)
protein (338aa)
purB; adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2] Tax=RBG_16_OP11_Woesebacteria_34_12_curated
Adenylosuccinate lyase n=1 Tax=Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) RepID=A3U7W5_CROAH
adenylosuccinate lyase
rifcsphigho2_01_scaffold_18412_8
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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6312..6680
-----------------
DNA (369bp)
protein (123aa)
purB; adenylosuccinate lyase (EC:4.3.2.2) Tax=CG_Aenigma_01
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase id=5799536 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_18412_9
Eggerthella sp. YY7918, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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6680..8092
-----------------
DNA (1413bp)
protein (471aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
Adenylosuccinate synthetase n=1 Tax=Eggerthella sp. (strain YY7918) RepID=F7UXB3_EEGSY
adenylosuccinate synthetase
rifcsphigho2_01_scaffold_18412_10
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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8089..8694
-----------------
DNA (606bp)
protein (202aa)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YN26_9FIRM
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellac
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
rifcsphigho2_01_scaffold_18412_11

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8694..9773
-----------------
DNA (1080bp)
protein (360aa)
purine biosynthesis protein purH n=2 Tax=unclassified Aminicenantes RepID=UPI0003B45307
Uncharacterized protein {ECO:0000313|EMBL:KKN11923.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
purH; bifunctional purine biosynthesis protein PurH
rifcsphigho2_01_scaffold_18412_12
AR11, Woesearchaeaota, DPANN, Archaea

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9809..10375
-----------------
DNA (567bp)
protein (189aa)
hypothetical protein Tax=AR11
rifcsphigho2_01_scaffold_18412_13

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10412..11977
-----------------
DNA (1566bp)
protein (522aa)
ski2-type helicase; K03726 helicase [EC:3.6.4.-] id=5045823 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Helicase {ECO:0000313|EMBL:KHO46436.1}; EC=3.6.4.- {ECO:0000313|EMBL:KHO46436.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
helicase (EC:3.6.4.-)
rifcsphigho2_01_scaffold_18412_14
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

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comp(12008..12793)
-----------------
DNA (786bp)
protein (262aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEW6_METFS
hypothetical protein Tax=RBG_13_Actinobacteria_55_18_curated
hypothetical protein
rifcsphigho2_01_scaffold_18412_15

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13069..13302
-----------------
DNA (234bp)
protein (78aa)
hypothetical protein
hypothetical protein id=5048108 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO45153.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsphigho2_01_scaffold_18412_16

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13302..13697
-----------------
DNA (396bp)
protein (132aa)
Protein containing Nucleotide binding protein, PINc protein
Uncharacterized protein {ECO:0000313|EMBL:KKN07922.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
id=5048107 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_18412_17
GWA2_Nitrospirae_42_11_curated, Nitrospirae, Bacteria

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comp(13669..14382)
-----------------
DNA (714bp)
protein (238aa)
rluB; 23S rRNA pseudouridylate synthase B (EC:4.2.1.70); K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=GWA2_Nitrospirae_42_11_curated
Pseudouridine synthase n=2 Tax=Geobacter sulfurreducens RepID=D7AIJ0_GEOSK
rluB; 23S rRNA pseudouridine 2605 synthase
rifcsphigho2_01_scaffold_18412_18
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

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14557..15777
-----------------
DNA (1221bp)
protein (407aa)
Sensor histidine kinase, HAMP domain-containing n=2 Tax=Geobacter metallireducens RepID=Q39WS7_GEOMG
histidine kinase Tax=RBG_16_Chloroflexi_64_43_curated
sensor histidine kinase, HAMP domain-containing
rifcsphigho2_01_scaffold_18412_19
unknown

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15823..16176
-----------------
DNA (354bp)
protein (118aa)

This feature has no annotations

Displaying 19 items

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