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rifcsphigho2_01_scaffold_18472

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_18472_1
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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comp(49..309)
-----------------
DNA (261bp)
protein (87aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036CDCF0
hypothetical protein Tax=RBG_16_Micrarchaeota_49_10_curated
hypothetical protein
rifcsphigho2_01_scaffold_18472_2
unknown

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comp(335..439)
-----------------
DNA (105bp)
protein (35aa)

This feature has no annotations

rifcsphigho2_01_scaffold_18472_3
Parcubacteria bacterium GW2011_GWA1_42_7, Parcubacteria, Bacteria

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601..876
-----------------
DNA (276bp)
protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS70040.1}; TaxID=1618785 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_42_7.;"
hypothetical protein id=5042183 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein
rifcsphigho2_01_scaffold_18472_4
Parcubacteria bacterium GW2011_GWA1_42_7, Parcubacteria, Bacteria

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873..1205
-----------------
DNA (333bp)
protein (111aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS70041.1}; TaxID=1618785 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_42_7.;"
hypothetical protein id=18248134 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
rifcsphigho2_01_scaffold_18472_5
Thermoanaerobacter thermohydrosulfuricus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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1183..1428
-----------------
DNA (246bp)
protein (82aa)
Phage shock protein C, PspC n=3 Tax=Thermoanaerobacter RepID=G2MRC6_9THEO
phage shock protein PspC
Putative stress-responsive transcriptional regulator {ECO:0000313|EMBL:EMT38802.1}; TaxID=1198630 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanae
rifcsphigho2_01_scaffold_18472_6
GWA2_OD1_44_12, Parcubacteria, Bacteria

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comp(1594..2535)
-----------------
DNA (942bp)
protein (314aa)
hypothetical protein Tax=GWA2_OD1_44_12
rifcsphigho2_01_scaffold_18472_7
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

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2729..3688
-----------------
DNA (960bp)
protein (320aa)
UPI0003D1B8B6 related cluster n=1 Tax=unknown RepID=UPI0003D1B8B6
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:KKP29131.1}; TaxID=1618806 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_31_28.;"
filamentation induced by cAMP protein Fic
rifcsphigho2_01_scaffold_18472_8
unknown

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3783..4049
-----------------
DNA (267bp)
protein (89aa)

This feature has no annotations

rifcsphigho2_01_scaffold_18472_9
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4083..4523)
-----------------
DNA (441bp)
protein (147aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W214_UNCMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ37579.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae
rifcsphigho2_01_scaffold_18472_10
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4520..5053)
-----------------
DNA (534bp)
protein (178aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W213_UNCMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ37580.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae
rifcsphigho2_01_scaffold_18472_11
CG_Pacearch_06, Pacearchaeota, Archaea

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5158..5811
-----------------
DNA (654bp)
protein (218aa)
Tax=CG_Pacearch_06
rifcsphigho2_01_scaffold_18472_12

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comp(5789..6412)
-----------------
DNA (624bp)
protein (208aa)
V-type ATPase subunit D; K02120 V-type H+-transporting ATPase subunit D [EC:3.6.3.14] id=5042339 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
atpD1; V-type H+-transporting ATPase subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_01_scaffold_18472_13

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comp(6415..7950)
-----------------
DNA (1536bp)
protein (512aa)
atpB-1; A-type ATP synthase subunit B (EC:3.6.3.14); K02118 V-type H+-transporting ATPase subunit B [EC:3.6.3.14] id=5042340 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ATP synthase, B subunit
rifcsphigho2_01_scaffold_18472_14
AR4, Woesearchaeaota, DPANN, Archaea

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comp(7947..9698)
-----------------
DNA (1752bp)
protein (584aa)
ATP synthase subunit A (EC:3.6.3.14); K02117 V-type H+-transporting ATPase subunit A [EC:3.6.3.14] id=5044034 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ATP synthase subunit A (EC:3.6.3.14); K02117 V-type H+-transporting ATPase subunit A [EC:3.6.3.14] Tax=AR4
atpA-1; A-type ATP synthase subunit A (EC:3.6.3.14)
rifcsphigho2_01_scaffold_18472_15

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comp(9695..10009)
-----------------
DNA (315bp)
protein (105aa)
atpF; V-type ATP synthase subunit F (EC:3.6.3.14)
V-type ATP synthase subunit F n=1 Tax=uncultured archaeon A07HR67 RepID=V4Y0H8_9ARCH
V-type ATP synthase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; V-ATPase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archa
rifcsphigho2_01_scaffold_18472_16

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comp(10006..10254)
-----------------
DNA (249bp)
protein (83aa)
ATP synthase A1 subunit C; K02119 V-type H+-transporting ATPase subunit C [EC:3.6.3.14] id=5042343 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
V-type ATP synthase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; V-ATPase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
Displaying 16 items

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