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rifcsphigho2_01_scaffold_28110

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_28110_1

Not on your lists

comp(3..488)
-----------------
DNA (486bp)
protein (162aa)
hypothetical protein
Marine sediment metagenome DNA, contig: S01H1_S08283 {ECO:0000313|EMBL:GAG07102.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Putative uncharacterized protein id=5241512 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_28110_2
CG_Micra_02, Micraarchaeota, Archaea

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comp(485..1066)
-----------------
DNA (582bp)
protein (194aa)
hypothetical protein Tax=CG_Micra_02
rifcsphigho2_01_scaffold_28110_3
unknown

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comp(1094..1456)
-----------------
DNA (363bp)
protein (121aa)

This feature has no annotations

rifcsphigho2_01_scaffold_28110_4
R_OP11_Gottesmanbacteria_46_9, Gottesmanbacteria, Microgenomates, Bacteria

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comp(1461..3416)
-----------------
DNA (1956bp)
protein (652aa)
circadian clock protein KaiC (EC:2.7.11.1)
Circadian clock protein kinase KaiC n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G2S4_9CYAN
circadian clock protein KaiC Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_46_9_curated
rifcsphigho2_01_scaffold_28110_5
unknown

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comp(3511..3798)
-----------------
DNA (288bp)
protein (96aa)

This feature has no annotations

rifcsphigho2_01_scaffold_28110_6
R_OD1_Falkowbacteria_45_15, Falkowbacteria, Parcubacteria, Bacteria

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comp(3949..4896)
-----------------
DNA (948bp)
protein (316aa)
id=4379344 Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_45_15_curated
rifcsphigho2_01_scaffold_28110_7
R_OD1_Falkowbacteria_45_15, Falkowbacteria, Parcubacteria, Bacteria

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comp(4898..5605)
-----------------
DNA (708bp)
protein (236aa)
periplasmic copper-binding protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_45_15_curated
Halomucin id=4379343 bin=PER_GWC2_41_7 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_01_scaffold_28110_8
R_OD1_Falkowbacteria_45_15, Falkowbacteria, Parcubacteria, Bacteria

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comp(5580..10124)
-----------------
DNA (4545bp)
protein (1515aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VX8_METBU
periplasmic copper-binding protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_45_15_curated
hypothetical protein
rifcsphigho2_01_scaffold_28110_9
R_OD1_Falkowbacteria_45_15, Falkowbacteria, Parcubacteria, Bacteria

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comp(10134..11540)
-----------------
DNA (1407bp)
protein (469aa)
putative circadian clock protein KaiC (EC:2.7.11.1) id=5241500 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
RecA-superfamily ATPases implicated in signal transduction Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_45_15_curated
hypothetical protein
rifcsphigho2_01_scaffold_28110_10
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(11663..13561)
-----------------
DNA (1899bp)
protein (633aa)
id=5048027 Tax=CG_Woesearch_02
id=5048027 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_01_scaffold_28110_11

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comp(13612..14040)
-----------------
DNA (429bp)
protein (143aa)
Putative RNA-binding protein, contains TRAM domain id=5800293 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61624.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
deoxyribonuclease/rho motif-related TRAM
rifcsphigho2_01_scaffold_28110_12
Kosmotoga olearia, Kosmotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

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14162..14608
-----------------
DNA (447bp)
protein (149aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=521045 species="Bacteria; Thermotogae; Kosmotogal
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CFT7_KOSOT
peptidylprolyl isomerase FKBP-type
rifcsphigho2_01_scaffold_28110_13
unknown

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comp(14605..15144)
-----------------
DNA (540bp)
protein (180aa)

This feature has no annotations

rifcsphigho2_01_scaffold_28110_14
unknown

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comp(15423..16385)
-----------------
DNA (963bp)
protein (321aa)

This feature has no annotations

rifcsphigho2_01_scaffold_28110_15
R_RIF_OP11_02_39_21, RIF-OP11-2, Microgenomates, Bacteria

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16469..17194
-----------------
DNA (726bp)
protein (242aa)
Methyltransferase, FkbM family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DCL5_SINAD
FkbM family methyltransferase Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_02_39_21_curated
FkbM family methyltransferase
Displaying 15 items

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