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rifcsphigho2_01_scaffold_44226

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_44226_1
AR11, Woesearchaeaota, DPANN, Archaea

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3..539
-----------------
DNA (537bp)
protein (179aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000378A425
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=AR11
Cell division protein FtsZ
rifcsphigho2_01_scaffold_44226_2
CG_Woesearch_02, Woesearchaeota, Archaea

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542..712
-----------------
DNA (171bp)
protein (57aa)
secE; preprotein translocase subunit SecE; K07342 protein transport protein SEC61 subunit gamma and related proteins Tax=CG_Woesearch_02
rifcsphigho2_01_scaffold_44226_3
CG_Woesearch_02, Woesearchaeota, Archaea

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715..1188
-----------------
DNA (474bp)
protein (158aa)
transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG Tax=CG_Woesearch_02
NusG antitermination factor id=5799592 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
LSU ribosomal protein L24A Rpl24A
rifcsphigho2_01_scaffold_44226_4
CG_Woesearch_01, Woesearchaeota, Archaea

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1221..1763
-----------------
DNA (543bp)
protein (181aa)
seg Tax=CG_Woesearch_01
seg id=5799838 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_44226_5
unknown

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1767..2279
-----------------
DNA (513bp)
protein (171aa)

This feature has no annotations

rifcsphigho2_01_scaffold_44226_6
CG_Woesearch_02, Woesearchaeota, Archaea

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2317..3066
-----------------
DNA (750bp)
protein (250aa)
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=CG_Woesearch_02
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=5043660 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L11
rifcsphigho2_01_scaffold_44226_7
GWB2_Planctomycetes_41_19_curated, Brocadiales, Planctomycetes, Bacteria

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3100..3906
-----------------
DNA (807bp)
protein (269aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K03660 N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] Tax=GWB2_Planctomycetes_41_19_curated
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Similar to 8-oxoguanine glycosylase (Hogg1) id=4810420 bin=GWA2_Planctomycete_KSU_39_15 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
rifcsphigho2_01_scaffold_44226_8

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comp(4161..5669)
-----------------
DNA (1509bp)
protein (503aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=1579365 species="Archaea.;" source=
lysyl-tRNA synthetase (EC:6.1.1.6); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] id=5043637 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
lysyl-tRNA synthetase, class I (EC:6.1.1.6)
rifcsphigho2_01_scaffold_44226_9
unknown

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comp(5686..5808)
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

rifcsphigho2_01_scaffold_44226_10
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(5847..6314)
-----------------
DNA (468bp)
protein (156aa)
AsnC family transcriptional regulator Tax=RBG_13_Woesearchaeota_36_6_curated
AsnC family transcriptional regulator id=5045866 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
AsnC family transcriptional regulator
rifcsphigho2_01_scaffold_44226_11
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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6510..6977
-----------------
DNA (468bp)
protein (156aa)
50S ribosomal protein L15e n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZJY9_THELI
50S ribosomal protein L15e; K02877 large subunit ribosomal protein L15e Tax=RBG_13_Woesearchaeota_36_6_curated
50S ribosomal protein L15
Displaying 11 items

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