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rifcsphigho2_01_scaffold_20980

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_20980_1
unknown

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1..408
-----------------
DNA (408bp)
protein (136aa)

This feature has no annotations

rifcsphigho2_01_scaffold_20980_2
unknown

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544..1497
-----------------
DNA (954bp)
protein (318aa)

This feature has no annotations

rifcsphigho2_01_scaffold_20980_3

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comp(1500..2465)
-----------------
DNA (966bp)
protein (322aa)
rfc; replication factor C small subunit; K04801 replication factor C small subunit id=5046355 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Replication factor C small subunit, replication factor C small subunit {ECO:0000313|EMBL:KHO46156.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rfc; replication factor C small subunit
rifcsphigho2_01_scaffold_20980_4

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comp(2503..2763)
-----------------
DNA (261bp)
protein (87aa)
PRC-barrel domain protein id=5800189 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
PRC-barrel protein {ECO:0000313|EMBL:AJF61520.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
PRC-barrel protein
rifcsphigho2_01_scaffold_20980_5
GWB1_OP11_38_8, Woesebacteria, Microgenomates, Bacteria

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comp(2846..3508)
-----------------
DNA (663bp)
protein (221aa)
Multiple antibiotic resistance (MarC)-related protein n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BCH7_METIK
Multiple antibiotic resistance (MarC)-related protein {ECO:0000313|EMBL:KKQ84168.1}; TaxID=1618570 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_38_
multiple antibiotic resistance (MarC)-like protein
rifcsphigho2_01_scaffold_20980_6
AR15, Woesearchaeaota, DPANN, Archaea

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3577..4653
-----------------
DNA (1077bp)
protein (359aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Uncharacterized protein id=5800116 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein Tax=AR15
rifcsphigho2_01_scaffold_20980_7
CG_Pacearch_03, Pacearchaeota, Archaea

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comp(4646..4924)
-----------------
DNA (279bp)
protein (93aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A7T4_9BACT
Tax=CG_Pacearch_03
rifcsphigho2_01_scaffold_20980_8
unknown

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comp(4971..5567)
-----------------
DNA (597bp)
protein (199aa)

This feature has no annotations

rifcsphigho2_01_scaffold_20980_9
GWA2_OD1_43_9, Magasanikbacteria, Parcubacteria, Bacteria

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5782..6783
-----------------
DNA (1002bp)
protein (334aa)
pepP; putative Xaa-Pro aminopeptidase (EC:3.4.11.9); K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] id=67889 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
XAA-pro dipeptidase; X-pro peptidase Tax=GWA2_OD1_43_9
X-Pro dipeptidase
rifcsphigho2_01_scaffold_20980_10
CG_Woesearch_01, Woesearchaeota, Archaea

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6817..8229
-----------------
DNA (1413bp)
protein (471aa)
Zinc-dependent protease, TldD/PmbA family n=1 Tax=Thermococcus sp. AM4 RepID=B7R4K0_9EURY
TldD/PmbA family zinc-dependent protease; K03568 TldD protein Tax=CG_Woesearch_01
TldD/PmbA family zinc-dependent protease
rifcsphigho2_01_scaffold_20980_11
CG_Pacearch_04, Pacearchaeota, Archaea

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8231..9550
-----------------
DNA (1320bp)
protein (440aa)
Zinc-dependent protease, TldD/PmbA family n=1 Tax=Thermococcus sp. AM4 RepID=B7R4K1_9EURY
hypothetical protein; K03592 PmbA protein Tax=CG_Pacearch_04
putative Zn-dependent protease
rifcsphigho2_01_scaffold_20980_12
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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9547..10698
-----------------
DNA (1152bp)
protein (384aa)
proteasome-activating nucleotidase; K03420 proteasome regulatory subunit Tax=RBG_13_Woesearchaeota_36_6_curated
NEQ186 id=5800112 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
proteasome-activating nucleotidase
rifcsphigho2_01_scaffold_20980_13
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(10684..11313)
-----------------
DNA (630bp)
protein (210aa)
phosphoglycolate phosphatase (EC:3.1.3.18)
Haloacid dehalogenase n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CR54_THEYO
HAD family hydrolase Tax=CG_Woesearch_02
rifcsphigho2_01_scaffold_20980_14
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(11436..13271)
-----------------
DNA (1836bp)
protein (612aa)
methyltransferase; K15429 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=CG_Woesearch_02
Met-10+ protein id=5800111 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_01_scaffold_20980_15
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(13268..14293)
-----------------
DNA (1026bp)
protein (342aa)
rad2; flap endonuclease-1; K04799 flap endonuclease-1 [EC:3.-.-.-] id=5046346 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
flap endonuclease-1 (EC:3.1.-.-)
endonuclease Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsphigho2_01_scaffold_20980_16
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(14298..15164)
-----------------
DNA (867bp)
protein (289aa)
hypothetical protein
id=5046345 Tax=RBG_13_Woesearchaeota_36_6_curated
Putative uncharacterized protein id=5800109 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_20980_17
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(15203..15733)
-----------------
DNA (531bp)
protein (177aa)
tRNA-splicing endonuclease subunit alpha (EC:3.1.27.9); K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] Tax=CG_Woesearch_02
tRNA-splicing endonuclease subunit alpha (EC:3.1.27.9); K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] id=5046344 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA-intron endonuclease
rifcsphigho2_01_scaffold_20980_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(15782..17374)
-----------------
DNA (1593bp)
protein (531aa)
DNA polymerase II small subunit (EC:2.7.7.7); K02323 DNA polymerase II small subunit [EC:2.7.7.7] Tax=CG_Woesearch_02
DNA polymerase II small subunit (EC:2.7.7.7); K02323 DNA polymerase II small subunit [EC:2.7.7.7] id=5046338 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_01_scaffold_20980_19
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(17385..17924)
-----------------
DNA (540bp)
protein (180aa)
ORC1-type DNA replication protein n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QF40_9EURY id=5103158 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
cdc6; cell division control protein 6 Tax=CG_Woesearch_02
ORC1-type DNA replication protein
Displaying 19 items

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