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rifcsphigho2_01_scaffold_42117

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_42117_1
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(1..495)
-----------------
DNA (495bp)
protein (165aa)
Uncharacterized membrane protein n=1 Tax=nanoarchaeote Nst1 RepID=R1FUH2_9ARCH id=5103440 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
hypothetical protein Tax=CG_Woesearch_02
rifcsphigho2_01_scaffold_42117_2
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(533..982)
-----------------
DNA (450bp)
protein (150aa)
Transcriptional repressor NrdR n=1 Tax=Caloramator australicus RC3 RepID=I7KU60_9CLOT
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" s
nrdR; transcriptional repressor
rifcsphigho2_01_scaffold_42117_3
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(1254..1691)
-----------------
DNA (438bp)
protein (146aa)
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5043966 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=AR4
30S ribosomal protein S12
rifcsphigho2_01_scaffold_42117_4
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(1692..2117)
-----------------
DNA (426bp)
protein (142aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374B7B8
NusA family KH domain-containing protein; K02600 N utilization substance protein A Tax=CG_Woesearch_02
NusA family KH domain protein
rifcsphigho2_01_scaffold_42117_5

Not on your lists

comp(2101..2391)
-----------------
DNA (291bp)
protein (97aa)
NEQ179 id=5799591 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF60922.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
rifcsphigho2_01_scaffold_42117_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(2394..3527)
-----------------
DNA (1134bp)
protein (378aa)
DNA-directed RNA polymerase subunit A''; K03042 DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] Tax=CG_Woesearch_02
rpoA2; DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A'' id=5800703 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_42117_7
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(3514..5601)
-----------------
DNA (2088bp)
protein (696aa)
DNA-directed RNA polymerase, subunit a' (EC:2.7.7.6); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] Tax=CG_Woesearch_01
DNA-directed RNA polymerase subunit A' (EC:2.7.7.48); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5043970 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
rifcsphigho2_01_scaffold_42117_8
unknown

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5650..5952
-----------------
DNA (303bp)
protein (101aa)

This feature has no annotations

rifcsphigho2_01_scaffold_42117_9
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(6082..7884)
-----------------
DNA (1803bp)
protein (601aa)
rpoB2; DNA-directed RNA polymerase, subunit B' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] Tax=CG_Woesearch_01
rpoB2; DNA-directed RNA polymerase, subunit B' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] id=5043971 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
rifcsphigho2_01_scaffold_42117_10
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(7884..9371)
-----------------
DNA (1488bp)
protein (496aa)
RNA polymerase subunit B; K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] Tax=CG_Woesearch_01
DNA-directed RNA polymerase id=5800700 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase
rifcsphigho2_01_scaffold_42117_11
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(9364..9609)
-----------------
DNA (246bp)
protein (82aa)
rpoH; DNA-directed RNA polymerase subunit H; K03053 DNA-directed RNA polymerase subunit H [EC:2.7.7.6] Tax=RBG_13_Woesearchaeota_36_6_curated
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000373033A
Displaying 11 items

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