ggKbase home page

rifcsphigho2_01_scaffold_122413_4

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_49_8

partial RP 35 / 55 MC: 6 BSCG 4 / 51 ASCG 28 / 38 MC: 3
Location: 1539..1853

Top 3 Functional Annotations

Value Algorithm Source
Xylose isomerase domain protein TIM barrel n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XN37_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 101.0
  • Bit_score: 108
  • Evalue 4.50e-21
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:EEF58699.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedospha similarity UNIPROT
DB: UniProtKB
  • Identity: 48.5
  • Coverage: 101.0
  • Bit_score: 108
  • Evalue 6.30e-21
Xylose isomerase domain protein TIM barrel similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 99.0
  • Bit_score: 103
  • Evalue 3.10e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 315
ATGAAAAATGTCCCTGGCCTGAAATTCCATCTTGACATAGGCCATGCGAACCTTGAAAGCAGCAGAATCAGGACAGCATGGCTGCTGAAAAAATTCGGAAAGCGCCTGGCTCATGTGCATGCCTCTGATAATTTCGGAGGCACTTTAGACATGCACCTGCCCATTGGGCTTGGGAACATAGACTGGAAAAGCAATATCAGGCAGCTGAAAAAGCACGGGTACGACGGCACCGTAACATTAGAAGTTTTTCGCGGGCCAAAAATAGGGCTTGCTGTAAGTCATAAGCTGTTCAGGAAAATCTGGCAGGATTCCTAG
PROTEIN sequence
Length: 105
MKNVPGLKFHLDIGHANLESSRIRTAWLLKKFGKRLAHVHASDNFGGTLDMHLPIGLGNIDWKSNIRQLKKHGYDGTVTLEVFRGPKIGLAVSHKLFRKIWQDS*