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rifcsphigho2_01_scaffold_122413

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_122413_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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1..465
-----------------
DNA (465bp)
protein (155aa)
fibrillarin; K04795 fibrillarin-like pre-rRNA processing protein Tax=RBG_13_Woesearchaeota_36_6_curated
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase id=5799901 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
fibrillarin
rifcsphigho2_01_scaffold_122413_2
GWA2_OD1_40_10_partial, Magasanikbacteria, Parcubacteria, Bacteria

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comp(338..1039)
-----------------
DNA (702bp)
protein (234aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=uncultured bacterium RepID=K2EMS3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKR34415.1}; TaxID=1619037 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_40_10.;"
CDP-alcohol phosphatidyltransferase
rifcsphigho2_01_scaffold_122413_3
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1114..1542
-----------------
DNA (429bp)
protein (143aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Geobacter sp. (strain M21) RepID=C6DZM7_GEOSM
xylose isomerase
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ACT16609.1}; TaxID=443144 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="
rifcsphigho2_01_scaffold_122413_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1539..1853
-----------------
DNA (315bp)
protein (105aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XN37_9BACT
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:EEF58699.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedospha
Xylose isomerase domain protein TIM barrel
rifcsphigho2_01_scaffold_122413_5
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(1850..3286)
-----------------
DNA (1437bp)
protein (479aa)
cysS; Cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=CG_Woesearch_02
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase id=5799784 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_122413_6

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comp(3290..4288)
-----------------
DNA (999bp)
protein (333aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] id=5048462 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02005}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02005};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02005}; TaxID=1579365 species="Archaea.;" source=
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Suspect SCG annotation. See neighboring gene [rifcsphigho2_01_scaffold_122413_7].
rifcsphigho2_01_scaffold_122413_7
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(4285..5766)
-----------------
DNA (1482bp)
protein (494aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RBG_13_Pacearchaeota_36_9_curated
valS; valyl-tRNA synthetase (EC:6.1.1.9)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] id=5241412 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Displaying 7 items

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