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rifcsphigho2_01_scaffold_16335

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_16335_1
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

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1..567
-----------------
DNA (567bp)
protein (189aa)
Radical SAM domain protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S0Z8_FERPA
radical SAM protein Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
radical SAM protein
rifcsphigho2_01_scaffold_16335_2
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

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576..1370
-----------------
DNA (795bp)
protein (265aa)
Methyltransferase type 11 n=1 Tax=uncultured prokaryote RepID=H5SCP2_9ZZZZ
type 11 methyltransferase Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
group 1 glycosyl transferase
rifcsphigho2_01_scaffold_16335_3
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

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1367..3193
-----------------
DNA (1827bp)
protein (609aa)
hypothetical protein Tax=RBG_13_Chloroflexi_54_9_curated
Ets-domain containing protein id=42521 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
rifcsphigho2_01_scaffold_16335_4
RBG_16_RIF03_38_11_curated, RIF3, Bacteria

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3287..4726
-----------------
DNA (1440bp)
protein (480aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037039F7
radical SAM domain-containing protein Tax=RBG_16_RIF03_38_11_curated
radical SAM domain-containing protein
rifcsphigho2_01_scaffold_16335_5
AR10, Diapherotrites, DPANN, Archaea

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4727..6013
-----------------
DNA (1287bp)
protein (429aa)
nucleotide sugar dehydrogenase
nucleotide sugar dehydrogenase id=5241102 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 rbh
nucleotide sugar dehydrogenase Tax=AR10
rifcsphigho2_01_scaffold_16335_6
RBG_13_Bacteroidetes_46_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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6042..6848
-----------------
DNA (807bp)
protein (269aa)
Myo-inositol-monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=RBG_13_Bacteroidetes_46_8_curated
inositol-phosphate phosphatase (EC:3.1.3.25)
Inositol monophosphatase id=4173073 bin=GWF2_Bacteroidetes_41_9 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
rifcsphigho2_01_scaffold_16335_7
CG_CP01_01, CG_CP01, Bacteria

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6872..8314
-----------------
DNA (1443bp)
protein (481aa)
Uncharacterized protein id=8266386 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
membrane protein involved in the export of O-antigen and teichoic acid Tax=CG_CP01_01
membrane protein involved in the export of O-antigen and teichoic acid
rifcsphigho2_01_scaffold_16335_8
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

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comp(8311..9051)
-----------------
DNA (741bp)
protein (247aa)
Uncharacterized protein n=1 Tax=Anoxybacillus sp. SK3-4 RepID=T0B9C0_9BACI
hypothetical protein; K07090 Tax=RBG_13_WOR_2_41_10_curated
hypothetical protein
rifcsphigho2_01_scaffold_16335_9

Not on your lists

comp(9101..9793)
-----------------
DNA (693bp)
protein (231aa)
Sulfate adenylyltransferase, subunit 2 n=2 Tax=Bacteria RepID=B5E9A6_GEOBB
Marine sediment metagenome DNA, contig: S01H1_L02948 {ECO:0000313|EMBL:GAF83215.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
cysD-2; sulfate adenylyltransferase subunit 2
rifcsphigho2_01_scaffold_16335_10

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comp(9793..10563)
-----------------
DNA (771bp)
protein (257aa)
Marine sediment metagenome DNA, contig: S01H1_L02948 {ECO:0000313|EMBL:GAF83211.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein id=18315154 bin=Nanosalinarum tax=Nanosalinarum
rifcsphigho2_01_scaffold_16335_11

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comp(10560..11864)
-----------------
DNA (1305bp)
protein (435aa)
translation elongation factor 1a (ef-1a/ef-tu) (EC:2.7.7.4); K03231 elongation factor 1-alpha id=5043959 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Elongation factor 1-alpha
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
rifcsphigho2_01_scaffold_16335_12
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

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comp(11877..12098)
-----------------
DNA (222bp)
protein (74aa)
hypothetical protein n=1 Tax=unclassified Euryarchaeota (miscellaneous) RepID=UPI0003693BBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD08042.1}; TaxID=439481 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum boonei (strain DSM 19572 / T469).;"
rifcsphigho2_01_scaffold_16335_13
unknown

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12228..12638
-----------------
DNA (411bp)
protein (137aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003610D0C
hypothetical protein
rifcsphigho2_01_scaffold_16335_14
unknown

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comp(12591..12908)
-----------------
DNA (318bp)
protein (106aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16335_15
R_RIF_OD1_05_38_8, RIF-OD1-5, Parcubacteria, Bacteria

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comp(12954..13409)
-----------------
DNA (456bp)
protein (152aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_05_38_8_curated
Putative uncharacterized protein id=3027234 bin=GWC1_CPR2_39_9 species=Kosmotoga olearia genus=Kosmotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
hypothetical protein
rifcsphigho2_01_scaffold_16335_16
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13413..14981)
-----------------
DNA (1569bp)
protein (523aa)
Putative uncharacterized protein id=4511049 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
type I phosphodiesterase/nucleotide pyrophosphatase Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
type I phosphodiesterase/nucleotide pyrophosphatase
rifcsphigho2_01_scaffold_16335_17

Not on your lists

15094..15735
-----------------
DNA (642bp)
protein (214aa)
Fe-S oxidoreductase (EC:4.-.-.-)
Uncharacterized protein {ECO:0000313|EMBL:KKK83616.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein id=4749418 bin=GWC2_Deltaproteobacteria_55_46 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
Displaying 17 items

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