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rifcsphigho2_01_scaffold_21051

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_21051_1
unknown

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comp(3..128)
-----------------
DNA (126bp)
protein (42aa)

This feature has no annotations

rifcsphigho2_01_scaffold_21051_2

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comp(134..1636)
-----------------
DNA (1503bp)
protein (501aa)
glycyl-tRNA synthetase (EC:6.1.1.14)
glycyl-tRNA synthetase (EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] id=5240553 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Glycyl-tRNA synthetase {ECO:0000313|EMBL:AJF59546.1}; EC=6.1.1.14 {ECO:0000313|EMBL:AJF59546.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_01_scaffold_21051_3
unknown

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1799..2017
-----------------
DNA (219bp)
protein (73aa)

This feature has no annotations

rifcsphigho2_01_scaffold_21051_4

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2071..2895
-----------------
DNA (825bp)
protein (275aa)
nucleolar protein 56
rRNA biogenesis protein Nop56/Nop58; K14564 nucleolar protein 56 id=5240552 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Nucleolar protein 56 {ECO:0000313|EMBL:AJF59545.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_01_scaffold_21051_5
Candidatus Parvarchaeum acidophilus, Candidatus Parvarchaeum, Parvarchaeota, Archaea

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2935..3219
-----------------
DNA (285bp)
protein (95aa)
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GWI9_9EURY
Putative uncharacterized protein {ECO:0000313|EMBL:EFD92423.1}; TaxID=662762 species="Archaea; Parvarchaeota; Candidatus Parvarchaeum.;" source="Candidatus Parvarchaeum acidophilus ARMAN-5.;"
hypothetical protein
rifcsphigho2_01_scaffold_21051_6
AR10, Diapherotrites, DPANN, Archaea

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3274..3960
-----------------
DNA (687bp)
protein (229aa)
fibrillarin-like protein pre-rRNA processing protein
fibrillarin; K04795 fibrillarin-like pre-rRNA processing protein id=5240551 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
fibrillarin; K04795 fibrillarin-like pre-rRNA processing protein Tax=AR10
rifcsphigho2_01_scaffold_21051_7

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3945..4550
-----------------
DNA (606bp)
protein (202aa)
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:KHO55629.1}; EC=2.7.7.41 {ECO:0000313|EMBL:KHO55629.1};; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
hypothetical protein
hypothetical protein id=5240548 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_21051_8
unknown

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4661..5218
-----------------
DNA (558bp)
protein (186aa)

This feature has no annotations

rifcsphigho2_01_scaffold_21051_9

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5277..5516
-----------------
DNA (240bp)
protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO54304.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
rifcsphigho2_01_scaffold_21051_10
AR10, Diapherotrites, DPANN, Archaea

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5582..6289
-----------------
DNA (708bp)
protein (236aa)
hypothetical protein
hypothetical protein; K07731 putative transcriptional regulator id=5240544 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein; K07731 putative transcriptional regulator Tax=AR10
rifcsphigho2_01_scaffold_21051_11
AR10, Diapherotrites, DPANN, Archaea

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comp(6332..7042)
-----------------
DNA (711bp)
protein (237aa)
hypothetical protein; K07562 nonsense-mediated mRNA decay protein 3 Tax=AR10
hypothetical protein
hypothetical protein; K07562 nonsense-mediated mRNA decay protein 3 id=5240542 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_21051_12
AR10, Diapherotrites, DPANN, Archaea

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comp(7036..8304)
-----------------
DNA (1269bp)
protein (423aa)
beta-lactamase domain-containing protein; K07577 putative mRNA 3-end processing factor Tax=AR10
hypothetical protein
beta-lactamase domain-containing protein; K07577 putative mRNA 3-end processing factor id=5240540 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_21051_13

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8530..9150
-----------------
DNA (621bp)
protein (207aa)
acetyl-CoA synthetase I subunit beta
acetyl-CoA synthetase I subunit beta id=5240539 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Acetyl-CoA synthetase I subunit beta {ECO:0000313|EMBL:AJF59532.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Displaying 13 items

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